Fold library entry viewer: c3bgaB_

Added to library: Tue Mar 16 13:08:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	K	Q	P	L	P	E	W	Q	S	Q	Y	A	V	G	L	N	K	L	A	P	H	T	Y	V	W	P	Y	A	D	A	S	D	I	G	K	P	G	G	Y	E	Q	S	P	Y	Y	X	S	L	N	G	K	W	K	F	N	W	V	K	N	P	D	N	R	P	K	D	F	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				G	G	G		S	S			B	S	S											B	S		G	G	G	T	T	S	T	T	G	G	G	G	S	T	T															S	G	G	G	S		G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	S	Y	Y	T	G	G	W	A	D	I	N	V	P	G	N	W	E	R	Q	G	Y	G	T	A	I	Y	V	N	E	T	Y	E	F	D	D	K	X	F	N	F	K	K	N	P	P	L	V	P	F	A	E	N	E	V	G	S	Y	R	R	T	F	K	V	P	A	D	W	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S			T	T	S						S	S		G	G	G	G	T		S						S	S	S		T	T	S	S	G	G	G	T				B	T	T	B			S	T	T														G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	R	V	V	L	C	C	E	G	V	I	S	F	Y	Y	V	W	V	N	G	K	L	L	G	Y	N	Q	G	S	K	T	A	A	E	W	D	I	T	D	V	L	S	E	G	E	N	V	V	A	L	E	V	Y	R	W	S	S	G	A	Y	L	E	C	Q	D	X	W	R	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S				S							T	T									S	S	S							G	G	G			S	S										S			G	G	G	G	G	B			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	I	E	R	D	V	Y	L	Y	S	T	P	K	Q	Y	I	A	D	Y	K	V	S	A	S	L	D	K	E	K	Y	K	E	G	I	F	N	L	E	V	T	V	E	G	P	S	A	T	A	S	S	I	A	Y	T	L	K	D	A	S	G	K	A	V	L	Q	D	A	I	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									S	S													T	T	T	S		S											S			S	S											T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	S	R	G	L	S	N	F	I	A	F	D	E	K	K	I	A	E	V	K	A	W	N	A	E	H	P	N	L	Y	T	L	V	L	E	L	K	D	A	Q	G	K	V	T	E	L	T	G	C	E	V	G	F	R	T	S	E	I	K	D	G	R	F	C	I	N	G	V	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S												T	T			B	B		S	S	S	B												T	T	S												B							T	T					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	V	K	G	T	N	R	H	E	H	S	Q	L	G	R	T	V	S	K	E	L	X	E	Q	D	I	R	L	X	K	Q	H	N	I	N	X	V	R	N	S	H	Y	P	T	H	P	Y	W	Y	Q	L	C	D	R	Y	G	L	Y	X	I	D	E	A	N	I	E	S	H	G	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	T	T	B	S																	T	T							T	T	S														T								S		B		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	Y	G	P	A	S	L	A	K	D	S	T	W	L	T	A	H	X	D	R	T	H	R	X	Y	E	R	S	K	N	H	P	A	I	V	I	W	S	Q	G	N	E	A	G	N	G	I	N	F	E	R	T	Y	D	W	L	K	S	V	E	K	G	R	P	V	Q	Y	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T		T	T	T		G	G	G																T	T		T	T								S	S	S			S															S	S	S					G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	L	N	Y	N	T	D	I	Y	C	R	X	Y	R	S	V	D	E	I	K	A	Y	V	G	K	K	D	I	Y	R	P	F	I	L	C	E	Y	L	H	A	X	G	N	S	C	G	G	X	K	E	Y	W	E	V	F	E	N	E	P	X	A	Q	G	G	C	I	W	D	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S		S	S	B			T	T											T	S	T	T			S								S				S	S			T	T												T	T							S		S	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	Q	N	F	R	E	I	D	K	D	G	K	W	Y	W	T	Y	G	G	D	Y	G	P	E	G	I	P	S	F	G	N	F	C	G	N	G	L	V	N	A	V	R	E	P	H	P	H	L	L	E	V	K	K	I	Y	Q	N	I	K	A	T	L	S	D	R	K	N	L	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S							T	T	S	S	S	S	T	T			B		G	G	G	G				S	B		T	T			B													S								T	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	C	I	K	N	W	Y	D	F	S	N	L	N	E	Y	I	L	R	W	N	V	K	G	E	D	G	T	V	L	A	E	G	T	K	E	V	D	C	E	P	H	A	T	V	D	V	T	L	G	A	V	K	L	P	N	T	V	R	E	A	Y	L	N	L	S	W	S	R	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S			G	G	G										T	T															T	T														T	T		S											S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	P	L	V	D	T	D	W	E	V	A	Y	D	Q	F	V	L	A	G	N	K	N	T	T	A	Y	R	P	Q	K	A	G	E	T	A	F	V	V	D	K	N	T	G	A	L	S	S	L	T	L	D	G	K	E	L	L	A	A	P	I	T	L	S	L	F	R	P	A	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S		T	T	S													T	T			T	T	S					S								T	T	T									T	T					S													T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	N	D	N	R	D	R	N	G	A	R	L	W	R	K	A	G	L	N	N	L	T	Q	K	V	V	S	L	K	E	E	K	T	S	A	T	V	R	A	E	I	L	N	G	K	G	Q	K	V	G	X	A	D	F	V	Y	A	L	D	K	N	G	A	L	K	V	R	T	T	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		T	T	S							T	T	T	T	S												S	S											T	T	S														T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	P	D	T	A	I	V	K	S	X	A	R	L	G	L	T	F	R	X	A	D	A	Y	N	Q	V	S	Y	L	G	R	G	D	H	E	T	Y	I	D	R	N	Q	S	G	R	I	G	L	Y	D	T	T	V	E	R	X	F	H	Y	Y	A	T	P	Q	S	T	A	N	R	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S			S										T	T											S	S			B	T	T	B		S	S	S																	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	V	R	W	A	K	L	T	D	Q	A	G	E	G	V	F	X	E	S	N	R	P	F	Q	F	S	I	I	P	F	S	D	V	L	L	E	K	A	H	H	I	N	E	L	E	R	D	G	X	I	T	I	H	L	D	A	E	Q	A	G	V	G	T	A	T	C	G	P	G	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S																	S	S									S	S	G	G	G					S														T	T	T	T	S	S			S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000
Sequence	P	Q	Y	L	V	P	V	K	K	Q	S	F	E	F	T	L	Y	P	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S				S

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PDB structure

FASTA sequence

Hidden Markov model

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