Fold library entry viewer: c2je8B_

Added to library: Tue Mar 16 13:18:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	N	D	T	S	E	V	M	L	L	D	T	G	W	E	F	S	Q	S	G	T	E	K	W	M	P	A	T	V	P	G	T	V	H	Q	D	L	I	S	H	E	L	L	P	N	P	F	Y	G	M	N	E	K	K	I	Q	W	V	E	N	E	D	W	E	Y	R	T	S	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S	S						T	T	S								S	S										T	T	S	S			T	T	S	T	T	T	T	G	G	G	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	S	E	E	Q	L	N	R	D	G	I	Q	L	I	F	E	G	L	D	T	Y	A	D	V	Y	L	N	G	S	L	L	L	K	A	D	N	M	F	V	G	Y	T	L	P	V	K	S	V	L	R	K	G	E	N	H	L	Y	I	Y	F	H	S	P	I	R	Q	T	L	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	S							S				S							T	T								B	T	T								G	G	G			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	A	S	N	G	F	N	Y	P	A	D	N	D	H	H	E	K	H	L	S	V	F	S	R	K	A	P	Y	S	Y	G	W	D	W	G	I	R	M	V	T	S	G	V	W	R	P	V	T	L	R	F	Y	D	I	A	T	I	S	D	Y	Y	V	R	Q	L	S	L	T	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S					T	T	S		S	S	S		G	G	G	G	S	B	S		G	G	G	G		B	T	T	B										S								S	S															S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	A	R	L	S	N	E	L	I	V	N	Q	I	V	P	Q	K	I	P	A	E	V	R	V	N	V	S	L	N	G	T	T	V	T	E	V	K	Q	Q	V	T	L	Q	P	G	I	N	H	I	T	L	P	A	E	V	T	N	P	V	R	W	M	P	N	G	W	G	T	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S													T	T														S													S				B			T	T	S	S		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	Y	D	F	S	A	Q	I	A	C	G	D	R	I	V	A	E	Q	S	H	R	I	G	L	R	T	I	R	V	V	N	E	K	D	K	D	G	E	S	F	Y	F	E	V	N	G	I	P	M	F	A	K	G	A	N	Y	I	P	Q	D	A	L	L	P	N	V	T	T	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																							T	T									T	T													S		S	S	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	Q	T	L	F	R	D	M	K	E	A	N	M	N	M	V	R	I	W	G	G	G	T	Y	E	N	N	L	F	Y	D	L	A	D	E	N	G	I	L	V	W	Q	D	F	M	F	A	C	T	P	Y	P	S	D	P	T	F	L	K	R	V	E	A	E	A	V	Y	N	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T								T	T	S															T								S		B	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	L	R	N	H	A	S	L	A	M	W	C	G	N	N	E	I	L	E	A	L	K	Y	W	G	F	E	K	K	F	T	P	E	V	Y	Q	G	L	M	H	G	Y	D	K	L	F	R	E	L	L	P	S	T	V	K	E	F	D	S	D	R	F	Y	V	H	S	S	P	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T						S		B	S								S			T	T	S	S																	T	T											T	T	S				S	S	B	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	N	W	G	R	P	E	S	W	G	T	G	D	S	H	N	W	G	V	W	Y	G	K	K	P	F	E	S	L	D	T	D	L	P	R	F	M	S	E	F	G	F	Q	S	F	P	E	M	K	T	I	A	A	F	A	A	P	E	D	Y	Q	I	E	S	E	V	M	N	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		G	G	G	T	T	B	S						T	T	T	T	T				T	T					S			S	S								B													G	G	G		S	T	T	S						T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	K	S	S	I	G	N	S	L	I	R	T	Y	M	E	R	D	Y	I	I	P	E	S	F	E	D	F	V	Y	V	G	L	V	L	Q	G	Q	G	M	R	H	G	L	E	A	H	R	R	N	R	P	Y	C	M	G	T	L	Y	W	Q	L	N	D	S	W	P	V	V	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S	S	S													S				S	S																										T	T	T	T							S		S			S	S	S		B	B	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	S	I	D	Y	Y	G	N	W	K	A	L	H	Y	Q	A	K	R	A	F	A	P	V	L	I	N	P	I	Q	Q	N	D	S	L	S	V	Y	L	I	S	D	R	L	D	T	M	E	Q	M	T	L	E	M	K	V	V	D	F	D	G	K	T	L	G	K	K	I	Q	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	B		T	T			B											T		S									T	T											S	S														T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	L	E	V	P	A	N	T	S	K	C	V	Y	R	A	K	L	D	G	W	L	T	P	E	D	C	R	R	S	F	L	K	L	I	L	K	D	K	S	G	H	Q	V	A	E	S	V	H	F	F	R	K	T	K	D	L	Q	L	P	P	T	S	V	S	Y	Q	M	K	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T										S	T	T	T	S						T	T										T	T											S	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	G	K	C	E	L	T	L	F	S	S	M	L	A	K	D	I	F	I	E	T	P	L	Q	G	A	R	Y	S	D	N	F	F	D	L	L	P	G	E	R	K	K	V	I	I	T	S	P	R	I	K	K	G	E	E	L	P	V	N	I	K	H	I	R	E	T	Y	K	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									S	S										S	S	T	T				S			S					T	T										T	T			T	T	S									G	G	G	G
	.
Sequence	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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