Fold library entry viewer: c3cmgA_

Added to library: Tue Mar 16 12:19:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	R	Q	D	I	L	L	N	N	N	W	N	F	R	F	S	H	Q	V	Q	G	D	T	R	R	V	D	L	P	H	T	W	N	A	Q	D	A	L	A	G	K	I	D	Y	K	R	G	I	G	N	Y	E	K	A	L	Y	I	R	P	E	W	K	G	K	R	L	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S							T	T	S	T	T								S	S			T	T	T	T	T	G	G	G	T		T	T				S												G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	D	G	V	N	S	I	A	D	V	F	I	N	R	K	H	I	G	E	H	R	G	G	Y	G	A	F	I	F	E	I	T	D	L	V	K	Y	G	E	K	N	S	V	L	V	R	A	N	N	G	E	Q	L	D	I	M	P	L	V	G	D	F	N	F	Y	G	G	I	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			B	S							T	T									S	S	S							T	T	T	S		T	T	S														S	S	S	S		S	S		S	S					B			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	H	L	L	I	T	D	E	T	C	I	S	P	L	D	Y	A	S	P	G	V	Y	L	V	Q	E	V	V	S	P	Q	E	A	K	V	C	A	K	V	N	L	S	N	R	A	A	D	G	T	A	E	L	Q	V	L	V	T	D	G	T	K	V	I	C	K	E	S	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S					S		S	T	T	S		S										S	S														S	S	S												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	S	L	K	Q	G	A	D	I	L	E	Q	L	P	L	L	I	Q	K	P	R	L	W	N	G	C	E	D	P	F	M	Y	Q	V	S	I	S	L	H	K	D	G	K	Q	I	D	S	V	T	Q	P	L	G	L	R	Y	Y	H	T	D	P	D	K	G	F	F	L	N	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													S				B		G	G	G		B												T	T																			T	T	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	L	P	L	H	G	V	C	R	H	Q	D	R	A	E	V	G	N	A	L	R	P	Q	H	H	E	E	D	V	A	L	M	R	E	M	G	V	N	A	I	R	L	A	H	Y	P	Q	A	T	Y	M	Y	D	L	M	D	K	H	G	I	V	T	W	A	E	I	P	F	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S		B	T	T	T	B	T																	T	T							T	T	S														T										B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	G	G	Y	A	D	K	G	F	V	D	Q	A	S	F	R	E	N	G	K	Q	Q	L	I	E	L	I	R	Q	H	Y	N	H	P	S	I	C	F	W	G	L	F	N	E	L	K	E	V	G	D	N	P	V	E	Y	V	K	E	L	N	A	L	A	K	Q	E	D	P	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	S		S				S																			T	T		T	T									S			S	S	S	S																		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	T	T	S	A	S	N	Q	D	G	N	L	N	F	I	T	E	N	I	A	W	N	R	Y	D	G	W	Y	G	S	T	P	K	T	L	A	T	F	L	D	R	T	H	K	K	H	P	E	L	R	I	G	I	S	E	Y	G	A	G	A	S	I	Y	H	Q	Q	D	S	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	G	G	G	G	S	S	S	S							T	T	T	S	S	S		T															T	T													B	T	T				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	P	S	A	S	G	W	W	H	P	E	N	W	Q	T	Y	Y	H	M	E	N	W	K	I	I	A	E	R	P	F	V	W	G	T	F	V	W	N	M	F	D	F	G	A	A	H	R	T	E	G	D	R	P	G	I	N	D	K	G	L	V	T	F	D	R	K	V	R	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S			B																	T		T	T							S		S	B					T	T				T	T	S	T	T						S	B		T	T	S			B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	F	Y	F	Y	K	A	N	W	N	K	Q	E	P	M	I	Y	L	A	E	K	R	C	R	L	R	Y	Q	P	E	Q	T	F	M	A	F	T	T	A	P	E	A	E	L	F	V	N	G	V	S	C	G	K	Q	K	A	D	T	Y	S	T	V	V	W	K	N	V	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S						T	T	T	T							S	S								S	S	S							T	T										T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Sequence	S	G	E	N	I	I	R	V	T	T	P	G	K	K	P	L	T	D	E	V	T	V	E	Y	K	E	D	R	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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