PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2otbB_

Fold library id	PDB Header	Molecule	Title
c2otbB_	PDB header: fluorescent protein	Chain: B: PDB Molecule: gfp-like fluorescent chromoprotein cfp484;	PDBTitle: crystal structure of a monomeric cyan fluorescent protein2 in the fluorescent state

Links to external resources
Added to library: Tue Mar 16 13:22:06 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V I K P D M K I K L K M E G N V N G H A F V I E G E G E G K P Y D G T N T I N L E V K E G A P L P F S Y D I L T N A F N R A F T K Y P D D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T T T S
S
S
T T T
T T S
B
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P N Y F K Q S F P E G Y S W E R T M T F E D K G I V K V K S D I S M E E D S F I Y E I H L K G E N F P P N G P V M Q K K T L K W E P S T E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S
T T
T T S T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L Y V R D G V L V G D I K H K L L L E G G G H H R V D F K T I Y R A K K A V K L P D Y H F V D H R I E I L N H D K D Y N K V T V Y E S A V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
S S
T T S S

. .

Sequence R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	I	K	P	D	M	K	I	K	L	K	M	E	G	N	V	N	G	H	A	F	V	I	E	G	E	G	E	G	K	P	Y	D	G	T	N	T	I	N	L	E	V	K	E	G	A	P	L	P	F	S	Y	D	I	L	T	N	A	F	N	R	A	F	T	K	Y	P	D	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S												T	T													T	T	T	T											S		S			S		T					T	T			T	T	S		B		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	N	Y	F	K	Q	S	F	P	E	G	Y	S	W	E	R	T	M	T	F	E	D	K	G	I	V	K	V	K	S	D	I	S	M	E	E	D	S	F	I	Y	E	I	H	L	K	G	E	N	F	P	P	N	G	P	V	M	Q	K	K	T	L	K	W	E	P	S	T	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T											T	T	S													T	T															T	T	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Y	V	R	D	G	V	L	V	G	D	I	K	H	K	L	L	L	E	G	G	G	H	H	R	V	D	F	K	T	I	Y	R	A	K	K	A	V	K	L	P	D	Y	H	F	V	D	H	R	I	E	I	L	N	H	D	K	D	Y	N	K	V	T	V	Y	E	S	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T	T	S														S	S																					T	T	S	S
	.	.
Sequence	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)