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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3lwbA_

Fold library idPDB HeaderMoleculeTitle
c3lwbA_PDB header: ligaseChain: A: PDB Molecule: d-alanine--d-alanine ligase;PDBTitle: crystal structure of apo d-alanine:d-alanine ligase (ddl)2 from mycobacterium tuberculosis


Added to library: Sun Aug 29 02:45:54 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RDRRVRVAVVFGGAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANVSLPPGAGEVLESVDVVFP
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Known secondary structure (DSSP)
TT


S
TTT
TT








TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQECE
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Known secondary structure (DSSP)

TT

T

BSSS
BTT

B


TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence RLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVLEMPDGTLEASTL
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Known secondary structure (DSSP)
S
SB
STTTT

SGGGTT
SS


TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence GEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDG
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Known secondary structure (DSSP)

STT
SSSS
T
TT
SS



TT

STT
 .........290.........300.........310.........320...
Sequence PVINEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTLAR
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Known secondary structure (DSSP) SS


STTSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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