Email l.a.kelley@imperial.ac.uk Description P76578 Date Wed Jan 25 15:21:09 GMT 2012 Unique Job ID bcbb97527c014f13

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2pn5A_ 100.0 14 PDB header:immune system Chain: A: PDB Molecule:thioester-containing protein i; PDBTitle: crystal structure of tep1r 2 c3cu7A_ 100.0 14 PDB header:immune system Chain: A: PDB Molecule:complement c5; PDBTitle: human complement component 5 3 c2b39B_ 100.0 16 PDB header:immune system Chain: B: PDB Molecule:c3; PDBTitle: structure of mammalian c3 with an intact thioester at 3a resolution 4 c2a73B_ 100.0 15 PDB header:immune system Chain: B: PDB Molecule:complement c3; PDBTitle: human complement component c3 5 c3g6jB_ 100.0 15 PDB header:immune system Chain: B: PDB Molecule:complement c3 alpha chain; PDBTitle: c3b in complex with a c3b specific fab 6 c3pvmB_ 100.0 18 PDB header:immune system Chain: B: PDB Molecule:cobra venom factor; PDBTitle: structure of complement c5 in complex with cvf 7 d1hzfa_ 100.0 19 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Complement components 8 c1hzfA_ 100.0 19 PDB header:immune system Chain: A: PDB Molecule:complement factor c4a; PDBTitle: c4adg fragment of human complement factor c4a 9 d1c3da_ 100.0 19 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Complement components 10 c3hrzA_ 100.0 13 PDB header:immune system Chain: A: PDB Molecule:cobra venom factor; PDBTitle: cobra venom factor (cvf) in complex with human factor b 11 d1qqfa_ 100.0 16 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Complement components 12 c2qkiA_ 100.0 14 PDB header:immune system/hydrolase inhibitor Chain: A: PDB Molecule:complement c3; PDBTitle: human c3c in complex with the inhibitor compstatin 13 c3hs0B_ 100.0 14 PDB header:immune system Chain: B: PDB Molecule:cobra venom factor; PDBTitle: cobra venom factor (cvf) in complex with human factor b 14 c2a74B_ 99.9 11 PDB header:immune system Chain: B: PDB Molecule:complement component c3c; PDBTitle: human complement component c3c 15 c2p9rA_ 99.7 23 PDB header:signaling protein Chain: A: PDB Molecule:alpha-2-macroglobulin; PDBTitle: human alpha2-macroglogulin is composed of multiple domains,2 as predicted by homology with complement component c3 16 d2sqca1 99.6 16 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpene synthases 17 c3hrzC_ 99.6 10 PDB header:immune system Chain: C: PDB Molecule:cobra venom factor; PDBTitle: cobra venom factor (cvf) in complex with human factor b 18 c1o79A_ 99.6 20 PDB header:isomerase Chain: A: PDB Molecule:squalene--hopene cyclase; PDBTitle: structures of human oxidosqualene cyclase inhibitors bound2 to a homolgous enzyme 19 c1w6kA_ 99.4 18 PDB header:isomerase Chain: A: PDB Molecule:lanosterol synthase; PDBTitle: structure of human osc in complex with lanosterol 20 d1edya_ 99.4 15 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Alpha-macroglobulin receptor domain Family:Alpha-macroglobulin receptor domain 21 d1ayoa_ not modelled 99.4 16 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Alpha-macroglobulin receptor domain Family:Alpha-macroglobulin receptor domain 22 d1bv8a_ not modelled 99.4 14 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:Alpha-macroglobulin receptor domain Family:Alpha-macroglobulin receptor domain 23 d3es6b1 not modelled 99.4 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:SVA-like 24 d2sqca2 not modelled 99.3 15 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpene synthases 25 d1w6ka1 not modelled 99.3 18 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpene synthases 26 c2qkiC_ not modelled 99.2 7 PDB header:immune system/hydrolase inhibitor Chain: C: PDB Molecule:complement c3; PDBTitle: human c3c in complex with the inhibitor compstatin 27 d3dssb1 not modelled 98.6 17 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 28 c3e37B_ not modelled 98.2 13 PDB header:transferase Chain: B: PDB Molecule:protein farnesyltransferase subunit beta; PDBTitle: protein farnesyltransferase complexed with bisubstrate2 ethylenediamine scaffold inhibitor 5 29 d2h6fb1 not modelled 98.1 13 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 30 c1cwvA_ not modelled 97.8 10 PDB header:structural protein Chain: A: PDB Molecule:invasin; PDBTitle: crystal structure of invasin: a bacterial integrin-binding protein 31 c3q7aB_ not modelled 97.7 14 PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:farnesyltransferase beta subunit; PDBTitle: cryptococcus neoformans protein farnesyltransferase in complex with2 fpp and l-778,123 32 c2pmvB_ not modelled 97.4 11 PDB header:transport protein Chain: B: PDB Molecule:gastric intrinsic factor; PDBTitle: crystal structure of human intrinsic factor- cobalamin complex at 2.62 a resolution 33 c1tnuL_ not modelled 97.4 12 PDB header:transferase Chain: L: PDB Molecule:geranylgeranyl transferase type i beta subunit; PDBTitle: rat protein geranylgeranyltransferase type-i complexed with2 a ggpp analog and a gcincckvl peptide derived from rhob 34 d1n4qb_ not modelled 97.4 12 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Protein prenyltransferases 35 d1w6ka2 not modelled 97.1 19 Fold:alpha/alpha toroid Superfamily:Terpenoid cyclases/Protein prenyltransferases Family:Terpene synthases 36 c3draB_ not modelled 97.0 10 PDB header:transferase Chain: B: PDB Molecule:geranylgeranyltransferase type i beta subunit; PDBTitle: candida albicans protein geranylgeranyltransferase-i2 complexed with ggpp 37 d1w8oa1 not modelled 96.8 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 38 c1l9mB_ not modelled 96.6 15 PDB header:transferase Chain: B: PDB Molecule:protein-glutamine glutamyltransferase e3; PDBTitle: three-dimensional structure of the human transglutaminase 32 enzyme: binding of calcium ions change structure for3 activation 39 d1r76a_ not modelled 96.5 23 Fold:alpha/alpha toroid Superfamily:Family 10 polysaccharide lyase Family:Family 10 polysaccharide lyase 40 d1gxma_ not modelled 96.5 23 Fold:alpha/alpha toroid Superfamily:Family 10 polysaccharide lyase Family:Family 10 polysaccharide lyase 41 c2v3nA_ not modelled 96.1 13 PDB header:transport protein Chain: A: PDB Molecule:transcobalamin-2; PDBTitle: crystallographic analysis of upper axial ligand2 substitutions in cobalamin bound to transcobalamin 42 d2afaa1 not modelled 95.1 17 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:N-acylglucosamine (NAG) epimerase 43 c2kl6A_ not modelled 94.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the cardb domain of pf1109 from2 pyrococcus furiosus. northeast structural genomics3 consortium target pfr193a 44 c3e8vA_ not modelled 93.1 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible transglutaminase-family protein; PDBTitle: crystal structure of a possible transglutaminase-family2 protein proteolytic fragment from bacteroides fragilis 45 d1cwva1 not modelled 92.5 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 46 c1wlhA_ not modelled 91.7 12 PDB header:structural protein Chain: A: PDB Molecule:gelation factor; PDBTitle: molecular structure of the rod domain of dictyostelium2 filamin 47 d1h8la1 not modelled 91.5 13 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Carboxypeptidase regulatory domain 48 c3irpX_ not modelled 90.5 36 PDB header:cell adhesion Chain: X: PDB Molecule:uro-adherence factor a; PDBTitle: crystal structure of functional region of uafa from staphylococcus2 saprophyticus at 1.50 angstrom resolution 49 c3kptA_ not modelled 89.9 18 PDB header:cell adhesion Chain: A: PDB Molecule:collagen adhesion protein; PDBTitle: crystal structure of bcpa, the major pilin subunit of2 bacillus cereus 50 c2h0eA_ not modelled 89.4 12 PDB header:hydrolase Chain: A: PDB Molecule:transthyretin-like protein pucm; PDBTitle: crystal structure of pucm in the absence of substrate 51 d1qfha1 not modelled 89.3 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 52 d1f00i1 not modelled 88.9 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 53 c1kv3F_ not modelled 88.8 9 PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form 54 c2l0dA_ not modelled 88.8 14 PDB header:cell adhesion Chain: A: PDB Molecule:cell surface protein; PDBTitle: solution nmr structure of putative cell surface protein ma_4588 (272-2 376 domain) from methanosarcina acetivorans, northeast structural3 genomics consortium target mvr254a 55 c3qvaB_ not modelled 87.5 33 PDB header:hydrolase Chain: B: PDB Molecule:transthyretin-like protein; PDBTitle: structure of klebsiella pneumoniae 5-hydroxyisourate hydrolase 56 c1g0dA_ not modelled 86.6 15 PDB header:transferase Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: crystal structure of red sea bream transglutaminase 57 d1cwva2 not modelled 86.3 8 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 58 c2pz4A_ not modelled 85.2 16 PDB header:cell adhesion Chain: A: PDB Molecule:protein gbs052; PDBTitle: crystal structure of spab (gbs52), the minor pilin in gram-positive2 pathogen streptococcus agalactiae 59 d1kgia_ not modelled 85.0 11 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 60 d2q3za3 not modelled 84.8 8 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 61 c1h8lA_ not modelled 84.8 13 PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa 62 d1uwya1 not modelled 84.6 13 Fold:Prealbumin-like Superfamily:Carboxypeptidase regulatory domain-like Family:Carboxypeptidase regulatory domain 63 d2diba1 not modelled 84.4 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 64 c2r39A_ not modelled 83.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fixg-related protein; PDBTitle: crystal structure of fixg-related protein from vibrio parahaemolyticus 65 c3mn8A_ not modelled 83.4 10 PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short 66 c1uwyA_ not modelled 82.9 11 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase m; PDBTitle: crystal structure of human carboxypeptidase m 67 c2h1xB_ not modelled 82.7 18 PDB header:hydrolase Chain: B: PDB Molecule:5-hydroxyisourate hydrolase (formerly known as PDBTitle: crystal structure of 5-hydroxyisourate hydrolase (formerly2 known as trp, transthyretin related protein) 68 d1vjja3 not modelled 82.6 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 69 d1f86a_ not modelled 82.6 13 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 70 d2e9ia1 not modelled 82.3 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 71 c1f13A_ not modelled 81.7 10 PDB header:coagulation factor Chain: A: PDB Molecule:cellular coagulation factor xiii zymogen; PDBTitle: recombinant human cellular coagulation factor xiii 72 c3saeA_ not modelled 81.7 9 PDB header:lyase Chain: A: PDB Molecule:alpha-bisabolene synthase; PDBTitle: structure of a three-domain sesquiterpene synthase: a prospective2 target for advanced biofuels production 73 d1tfpa_ not modelled 81.3 16 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 74 d1ttaa_ not modelled 80.8 11 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 75 d1g0da3 not modelled 80.7 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 76 d1oo2a_ not modelled 80.6 18 Fold:Prealbumin-like Superfamily:Transthyretin (synonym: prealbumin) Family:Transthyretin (synonym: prealbumin) 77 c2k7pA_ not modelled 80.4 14 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 16-17 78 c2gpzC_ not modelled 80.2 24 PDB header:hydrolase Chain: C: PDB Molecule:transthyretin-like protein; PDBTitle: transthyretin-like protein from salmonella dublin 79 d1vjja2 not modelled 79.8 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 80 d1ex0a2 not modelled 77.5 11 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 81 d2q3za2 not modelled 77.4 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 82 d2d7ma1 not modelled 77.0 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 83 d1qfha2 not modelled 76.6 10 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 84 d1ex0a3 not modelled 76.2 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 85 c2xzzA_ not modelled 74.1 14 PDB header:transferase Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase k; PDBTitle: crystal structure of the human transglutaminase 1 beta-barrel domain 86 c2nsmA_ not modelled 73.5 20 PDB header:hydrolase Chain: A: PDB Molecule:carboxypeptidase n catalytic chain; PDBTitle: crystal structure of the human carboxypeptidase n (kininase i)2 catalytic domain 87 d2dmca1 not modelled 71.9 12 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 88 c2ww8A_ not modelled 71.8 24 PDB header:cell adhesion Chain: A: PDB Molecule:cell wall surface anchor family protein; PDBTitle: structure of the pilus adhesin (rrga) from streptococcus2 pneumoniae 89 c2e9jA_ not modelled 71.7 21 PDB header:structural protein Chain: A: PDB Molecule:filamin-b; PDBTitle: solution structure of the 14th filamin domain from human2 filamin-b 90 d2dmba1 not modelled 70.9 25 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 91 c2k7qA_ not modelled 69.3 13 PDB header:structural protein Chain: A: PDB Molecule:filamin-a; PDBTitle: filamin a ig-like domains 18-19 92 d1cwva3 not modelled 67.9 8 Fold:Immunoglobulin-like beta-sandwich Superfamily:Invasin/intimin cell-adhesion fragments Family:Invasin/intimin cell-adhesion fragments 93 d1v05a_ not modelled 67.4 17 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 94 d1g0da2 not modelled 67.0 9 Fold:Immunoglobulin-like beta-sandwich Superfamily:Transglutaminase, two C-terminal domains Family:Transglutaminase, two C-terminal domains 95 c3k11A_ not modelled 67.0 13 PDB header:hydrolase Chain: A: PDB Molecule:putative glycosyl hydrolase; PDBTitle: crystal structure of putative glycosyl hydrolase (np_813087.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.80 a resolution 96 c1ksrA_ not modelled 65.8 15 PDB header:actin binding protein Chain: A: PDB Molecule:gelation factor; PDBTitle: the repeating segments of the f-actin cross-linking2 gelation factor (abp-120) have an immunoglobulin fold, nmr,3 20 structures 97 c1qfhB_ not modelled 65.1 13 PDB header:actin binding protein Chain: B: PDB Molecule:protein (gelation factor); PDBTitle: dimerization of gelation factor from dictyostelium2 discoideum: crystal structure of rod domains 5 and 6 98 c3n6yA_ not modelled 65.1 18 PDB header:unknown function Chain: A: PDB Molecule:immunoglobulin-like protein; PDBTitle: crystal structure of an immunoglobulin-like protein (pa1606) from2 pseudomonas aeruginosa at 1.50 a resolution 99 c2kutA_ not modelled 63.3 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of gmr58a from geobacter metallireducens.2 northeast structural genomics consortium target gmr58a 100 c3ogrA_ not modelled 62.1 20 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose 101 c1xc6A_ not modelled 62.0 18 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: native structure of beta-galactosidase from penicillium sp. in complex2 with galactose 102 c3qe5A_ not modelled 60.5 14 PDB header:cell adhesion Chain: A: PDB Molecule:major cell-surface adhesin pac; PDBTitle: complete structure of streptococcus mutans antigen i/ii carboxy-2 terminus 103 d2dj4a1 not modelled 60.1 19 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 104 d1vjja1 not modelled 59.8 6 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Transglutaminase N-terminal domain 105 c2ds4A_ not modelled 59.4 17 PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 45; PDBTitle: solution structure of the filamin domain from human2 tripartite motif protein 45 106 d1wlha1 not modelled 58.3 16 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 107 c3pmmA_ not modelled 56.5 16 PDB header:hydrolase Chain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: the crystal structure of a possible member of gh105 family from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578 108 c2zxcA_ not modelled 54.5 11 PDB header:hydrolase Chain: A: PDB Molecule:neutral ceramidase; PDBTitle: seramidase complexed with c2 109 d2d7na1 not modelled 54.3 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 110 d2diaa1 not modelled 52.3 21 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 111 c2x5pA_ not modelled 51.8 15 PDB header:protein binding Chain: A: PDB Molecule:fibronectin binding protein; PDBTitle: crystal structure of the streptococcus pyogenes fibronectin binding2 protein fbab-b 112 c1f00I_ not modelled 49.2 10 PDB header:cell adhesion Chain: I: PDB Molecule:intimin; PDBTitle: crystal structure of c-terminal 282-residue fragment of2 enteropathogenic e. coli intimin 113 c2di7A_ not modelled 49.2 9 PDB header:structural protein Chain: A: PDB Molecule:bk158_1; PDBTitle: solution structure of the filamin domain from human bk158_12 protein 114 d1g4ma2 not modelled 49.1 14 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 115 d2d7pa1 not modelled 48.9 18 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Filamin repeat (rod domain) 116 c2e6jA_ not modelled 48.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hydin protein; PDBTitle: solution structure of the c-terminal papd-like domain from2 human hydin protein 117 d1ayra2 not modelled 47.4 9 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Arrestin/Vps26-like 118 c2okmA_ not modelled 46.1 11 PDB header:cell adhesion Chain: A: PDB Molecule:collagen adhesin; PDBTitle: crystal structure of ace19, the collagen binding subdomain2 of enterococcus faecalis surface protein ace 119 c2z1pA_ not modelled 45.4 12 PDB header:cell adhesion Chain: A: PDB Molecule:collagen adhesin protein; PDBTitle: the enterococcus faecalis mscramm ace binds its ligands by2 the collagen hug model 120 c3n9tA_ not modelled 45.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:pnpc; PDBTitle: cryatal structure of hydroxyquinol 1,2-dioxygenase from pseudomonas2 putida dll-e4