Fold library entry viewer: c2a73B_

Added to library: Tue Mar 16 12:42:08 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Q	L	T	E	K	R	M	D	K	V	G	K	Y	P	K	E	L	R	K	C	C	E	D	G	M	R	E	N	P	M	R	F	S	C	Q	R	R	T	R	F	I	S	L	G	E	A	C	K	K	V	F	L	D	C	C	N	Y	I	T	E	L	R	R	Q	H	A	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T					T	T	T	S	S		G	G	G									S			S	S								T	T	S			S																			T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	E	D	I	I	A	E	E	N	I	V	S	R	S	E	F	P	E	S	W	L	W	N	V	E	D	L	K	E	P	P	K	N	G	I	S	T	K	L	M	N	I	F	L	K	D	S	I	T	T	W	E	I	L	A	V	S	M	S	D	K	K	G	I	C	V	A	D	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S																					S			B	T	T	B											S														T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	T	V	M	Q	D	F	F	I	D	L	R	L	P	Y	S	V	V	R	N	E	Q	V	E	I	R	A	V	L	Y	N	Y	R	Q	N	Q	E	L	K	V	R	V	E	L	L	H	N	P	A	F	C	S	L	A	T	T	K	R	R	H	Q	Q	T	V	T	I	P	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S									S				T	T														S	S													T	T				S			S	S	S										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	S	L	S	V	P	Y	V	I	V	P	L	K	T	G	L	Q	E	V	E	V	K	A	A	V	Y	H	H	F	I	S	D	G	V	R	K	S	L	K	V	V	P	E	G	I	R	M	N	K	T	V	A	V	R	T	L	D	P	E	R	L	G	R	E	G	V	Q	K	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S													S	S	S															S	S														T	B	T	T	T	B	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	P	P	A	D	L	S	D	Q	V	P	D	T	E	S	E	T	R	I	L	L	Q	G	T	P	V	A	Q	M	T	E	D	A	V	D	A	E	R	L	K	H	L	I	V	T	P	S	G	C	G	E	Q	N	M	I	G	M	T	P	T	V	I	A	V	H	Y	L	D	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	B		T	T											S	S	S	S	S									T	T	T	G	G	G	G		S	S				S	T	T	G	G	G	G	G	T													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	Q	W	E	K	F	G	L	E	K	R	Q	G	A	L	E	L	I	K	K	G	Y	T	Q	Q	L	A	F	R	Q	P	S	S	A	F	A	A	F	V	K	R	A	P	S	T	W	L	T	A	Y	V	V	K	V	F	S	L	A	V	N	L	I	A	I	D	S	Q	V	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T																		T	T	S			T	T	T			B	S	S	S	S	S		B														T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	A	V	K	W	L	I	L	E	K	Q	K	P	D	G	V	F	Q	E	D	A	P	V	I	H	Q	E	N	N	N	E	K	D	M	A	L	T	A	F	V	L	I	S	L	Q	E	A	K	D	I	C	E	E	Q	V	N	S	L	P	G	S	I	T	K	A	G	D	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B		T	T	S		B				S			S	S					T	T																	T	T	T	S	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	N	Y	M	N	L	Q	R	S	Y	T	V	A	I	A	G	Y	A	L	A	Q	M	G	R	L	K	G	P	L	L	N	K	F	L	T	T	A	K	D	K	N	R	W	E	D	P	G	K	Q	L	Y	N	V	E	A	T	S	Y	A	L	L	A	L	L	Q	L	K	D	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G			S													T	T	T													T	S	B	T	T	T	B				S	S																			T	T		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	V	P	P	V	V	R	W	L	N	E	Q	R	Y	Y	G	G	G	Y	G	S	T	Q	A	T	F	M	V	F	Q	A	L	A	Q	Y	Q	K	D	A	P	D	H	Q	E	L	N	L	D	V	S	L	Q	L	P	S	R	S	S	K	I	T	H	R	I	H	W	E	S	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T										T				B	S	S	S			S																			S	S													T	T		S	S								S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	L	R	S	E	E	T	K	E	N	E	G	F	T	V	T	A	E	G	K	G	Q	G	T	L	S	V	V	T	M	Y	H	A	K	A	K	D	Q	L	T	C	N	K	F	D	L	K	V	T	I	K	P	A	P	E	T	E	K	R	P	Q	D	A	K	N	T	M	I	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S										S	S																			S			S	S												T	T	S				S	S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	C	T	R	Y	R	G	D	Q	D	A	T	M	S	I	L	D	I	S	M	M	T	G	F	A	P	D	T	D	D	L	K	Q	L	A	N	G	V	D	R	Y	I	S	K	Y	E	L	D	K	A	F	S	D	R	N	T	L	I	I	Y	L	D	K	V	S	H	S	E	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S		B		S									S	S														S	S	S		S		S								S	S	S	S								S		B		S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	C	L	A	F	K	V	H	Q	Y	F	N	V	E	L	I	Q	P	G	A	V	K	V	Y	A	Y	Y	N	L	E	E	S	C	T	R	F	Y	H	P	E	K	E	D	G	K	L	N	K	L	C	R	D	E	L	C	R	C	A	E	E	N	C	F	I	Q	K	S	D	D	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S				S											T	T																S	S				S			S	S								T	T	S	S					T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	T	L	E	E	R	L	D	K	A	C	E	P	G	V	D	Y	V	Y	K	T	R	L	V	K	V	Q	L	S	N	D	F	D	E	Y	I	M	A	I	E	Q	T	I	K	S	G	S	D	E	V	Q	V	G	Q	Q	R	T	F	I	S	P	I	K	C	R	E	A	L	K	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		T	T																S	S																S	S				T	T									G	G	G
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.
Sequence	E	K	K	H	Y	L	M	W	G	L	S	S	D	F	W	G	E	K	P	N	L	S	Y	I	I	G	K	D	T	W	V	E	H	W	P	E	E	D	E	C	Q	D	E	E	N	Q	K	Q	C	Q	D	L	G	A	F	T	E	S	M	V	V	F	G	C	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									G	G	G			S		S	S	S							T	T									G	G	G	T	T	S																			T	S

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PDB structure

FASTA sequence

Hidden Markov model

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