Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1c3da_

Fold library idFoldSuperfamilyFamily
d1c3da_alpha/alpha toroidTerpenoid cyclases/Protein prenyltransferasesComplement components


Added to library: Tue Mar 16 13:51:59 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLDAERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPS
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)


GGGGGGG




SSTTTT
STTT
GGGTTB
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAFAAFVKRAPSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) S
B
SSTTS


TTTTS


B
TTS
B

SS

S
GGGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence RNNNEKDMALTAFVLISLQEAKDICEEQVNSLPGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGRLK
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) GS
TTTTTT
TTGGG


TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence GPLLNKFLTTAKDKNRWEDPGKQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYGGGYGSTQATF
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) SBTTTB


SS
TT
TTTTT



STT
 .........290....
Sequence MVFQALAQYQKDAP
Predicted secondary structure

SS confidence













Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D