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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1w6ka2

Fold library idFoldSuperfamilyFamily
d1w6ka2alpha/alpha toroidTerpenoid cyclases/Protein prenyltransferasesTerpene synthases


Added to library: Tue Mar 16 13:12:16 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPD
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Known secondary structure (DSSP)
BSST



TTS
TTS
B
SBTTS

BTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLP
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Known secondary structure (DSSP) STT
GGG

TTSS
GGGS



GGGGGS
TTSTT
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MSYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSA
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Known secondary structure (DSSP) TT





TTS
SS
GGG

SGGGTT


GGG
SS


T

 .........220.........230.........240.........250.........260.........270.........
Sequence HLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKM
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Known secondary structure (DSSP) TT

SS
TTSTSGGG
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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