Fold library entry viewer: c3ogrA_

Added to library: Sat Mar 19 08:53:13 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	G	P	L	Q	N	I	V	T	W	D	E	H	S	L	F	V	H	G	E	R	V	V	I	F	S	G	E	V	H	P	F	R	L	P	V	P	S	L	Y	L	D	V	F	H	K	I	K	A	L	G	F	N	T	V	S	F	Y	V	D	W	A	L	L	E	G	K	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S	S	S					S	S					T	T												G	G	G				G	G	G											T	T															S	B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	F	R	A	D	G	I	F	S	L	E	P	F	F	E	A	A	T	K	A	G	I	Y	L	L	A	R	P	G	P	Y	I	N	A	E	V	S	G	G	G	F	P	G	W	L	Q	R	V	K	G	K	L	R	T	D	A	P	D	Y	L	H	A	T	D	N	Y	V	A	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B					G	G	G		S											T									S				T	T	B	G	G	G	G			G	G	G	G	G			S		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	I	I	A	K	A	Q	I	T	N	G	G	P	V	I	L	Y	Q	P	E	N	E	Y	S	G	A	A	E	G	V	L	F	P	N	K	P	Y	M	Q	Y	V	I	D	Q	A	R	N	A	G	I	I	V	P	L	I	N	N	D	A	F	P	G	G	T	G	A	P	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	B	G	G	G	T	S	S							S	S					B		T	T	S		S	S															T	T			S		B	B			B	S	S	S			T	T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	G	S	V	D	I	Y	G	H	D	G	Y	P	L	G	F	D	C	A	H	P	S	A	W	P	D	N	G	L	P	T	T	W	R	Q	D	H	L	N	I	S	P	S	T	P	F	S	L	V	E	F	Q	G	G	A	F	D	P	F	G	G	W	G	F	E	Q	C	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S	B							T	T		S			S		T	T				T	T		S													T	T	S									S	S					T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	N	H	E	F	E	R	V	F	Y	K	N	N	M	A	A	G	V	T	I	F	N	I	Y	M	T	F	G	G	T	N	W	G	N	L	G	H	P	G	G	Y	T	S	Y	D	Y	G	A	S	I	R	E	D	R	R	I	D	R	E	K	Y	S	E	L	K	L	Q	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S														T	T		S											B			T	T		B		T	T	S		S	B			T	T		S	B		T	T					S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	L	K	V	S	P	G	Y	I	T	A	T	P	E	N	A	T	Q	G	V	Y	S	D	S	Q	N	I	V	I	T	P	L	L	A	K	E	S	G	D	F	F	V	V	R	H	A	N	Y	S	S	T	D	T	A	S	Y	T	V	K	L	P	T	S	A	G	D	L	T	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		T					S						B	S	S	S	S	S	S		S	S									S	S	S									S	S	T	T			S											T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	L	G	G	S	L	T	L	T	G	R	D	S	K	I	H	V	T	D	Y	P	V	G	K	F	T	L	L	Y	S	T	A	E	I	F	T	W	N	E	F	A	E	K	T	V	L	V	L	Y	G	G	A	Q	E	L	H	E	F	A	V	K	N	P	F	G	S	S	K	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S							T	T												T	T							S	S									S	S										T	T											S	T	T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	A	K	K	I	E	G	S	N	V	T	I	H	T	T	S	N	L	T	V	V	L	Q	W	T	A	S	S	A	R	Q	V	V	Q	L	G	S	L	V	I	Y	M	V	D	R	N	S	A	Y	N	Y	W	V	P	T	L	P	G	S	G	K	Q	S	A	Y	G	S	S	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S							T	T											S	S							T	T												T	T					B				S	S	T	T	G	G	G		S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	P	D	S	V	I	I	N	G	G	Y	L	I	R	S	V	A	I	K	G	N	A	L	S	V	Q	A	D	F	N	V	T	T	P	L	E	I	I	G	I	P	K	G	I	S	K	L	A	V	N	G	K	E	L	G	Y	S	V	S	E	L	G	D	W	I	A	H	P	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			B							S									T	T								B	S	S								S			T	T							T	T									T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	I	P	H	V	Q	V	P	E	L	T	K	L	K	W	Y	K	V	D	S	L	P	E	I	R	S	N	Y	D	D	S	R	W	P	L	A	N	L	R	T	S	N	N	T	Y	A	P	L	K	T	P	V	S	L	Y	G	S	D	Y	G	F	H	A	G	T	L	L	F	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	S							S		G	G	G	S	T	T				T	T	S		B				S					S	S	S				S	S	S			B	G	G	G	G	T			S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	F	T	A	R	T	A	R	Q	Q	L	F	L	S	T	Q	G	G	S	A	F	A	S	S	V	W	L	N	D	R	F	I	G	S	F	T	G	F	D	A	A	S	A	A	N	S	S	Y	T	L	D	R	L	V	R	G	R	R	Y	I	L	T	V	V	V	D	S	T	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S										S	T	T								T	T										T	T		S										S			T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	E	N	W	T	T	G	D	D	S	M	K	A	P	R	G	I	L	D	Y	A	L	T	S	S	S	G	A	N	V	S	I	S	W	K	L	T	G	N	L	G	G	E	D	Y	R	D	V	F	R	G	P	L	N	E	G	G	L	F	F	E	R	Q	G	F	H	L	P	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	B	T			G	G	G													T	T			B									S	S	T	T	T	T	S		S		T	T	T		S	S	S			S	S					T	T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	P	L	S	D	F	T	H	G	P	S	S	S	S	S	S	S	S	P	L	D	G	I	A	H	A	G	I	A	F	Y	A	A	K	L	P	L	H	L	P	A	Q	E	Y	D	I	P	L	S	F	V	F	D	N	A	T	A	A	A	P	Y	R	A	L	L	Y	V	N	G	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S	B				T	T	S	T	T			S	T	T	T		B	S	S	S															T	T	T													S	S											T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	Y	G	K	Y	V	S	N	I	G	P	Q	T	E	F	P	V	P	E	G	I	L	D	Y	N	G	D	N	W	I	G	V	A	L	W	A	L	E	S	R	G	A	K	V	P	G	L	A	L	K	S	K	S	P	I	L	T	G	R	E	R	V	E	V	V	K	G	P	H	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T										B	T	T	B		T														S	T	T		B			S														S
	.	.	.	.	.	.
Sequence	K	R	H	G	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T

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PDB structure

FASTA sequence

Hidden Markov model

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