Email l.a.kelley@imperial.ac.uk Description P23830 Date Wed Jan 25 15:20:43 GMT 2012 Unique Job ID b8a9660c6f91851a

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3hsiC_ 100.0 46 PDB header:transferase Chain: C: PDB Molecule:phosphatidylserine synthase; PDBTitle: crystal structure of phosphatidylserine synthase haemophilus2 influenzae rd kw20 2 c1v0sA_ 100.0 16 PDB header:hydrolase Chain: A: PDB Molecule:phospholipase d; PDBTitle: uninhibited form of phospholipase d from streptomyces sp.2 strain pmf 3 d1v0wa1 99.9 14 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Phospholipase D 4 c1xdoB_ 99.9 19 PDB header:transferase Chain: B: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of escherichia coli polyphosphate kinase 5 d1xdpa3 99.9 18 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 6 d1byra_ 99.9 15 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Nuclease 7 d1v0wa2 99.9 19 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Phospholipase D 8 c2o8rA_ 99.6 18 PDB header:transferase Chain: A: PDB Molecule:polyphosphate kinase; PDBTitle: crystal structure of polyphosphate kinase from2 porphyromonas gingivalis 9 d2o8ra3 98.5 14 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 10 d1xdpa4 98.1 15 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 11 c1q32C_ 97.9 14 PDB header:replication,transcription,hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna2 phosphodiesterase 12 c3sq3C_ 97.7 14 PDB header:hydrolase Chain: C: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure analysis of the yeast tyrosyl-dna phosphodiesterase2 h182a mutant 13 d2o8ra4 97.4 13 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Polyphosphate kinase C-terminal domain 14 c2c1lA_ 97.0 13 PDB header:hydrolase Chain: A: PDB Molecule:restriction endonuclease; PDBTitle: structure of the bfii restriction endonuclease 15 d1jy1a2 95.8 30 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 16 c1nopB_ 95.6 35 PDB header:hydrolase/dna Chain: B: PDB Molecule:tyrosyl-dna phosphodiesterase 1; PDBTitle: crystal structure of human tyrosyl-dna phosphodiesterase2 (tdp1) in complex with vanadate, dna and a human3 topoisomerase i-derived peptide 17 d1q32a2 94.1 30 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 18 d2f5tx2 62.9 16 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:TrmB middle domain-like 19 d1qzqa1 62.8 29 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 20 d1q32a1 51.7 11 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 21 c2f5tX_ not modelled 51.3 16 PDB header:transcription Chain: X: PDB Molecule:archaeal transcriptional regulator trmb; PDBTitle: crystal structure of the sugar binding domain of the archaeal2 transcriptional regulator trmb 22 d1jy1a1 not modelled 38.2 14 Fold:Phospholipase D/nuclease Superfamily:Phospholipase D/nuclease Family:Tyrosyl-DNA phosphodiesterase TDP1 23 c2a5hC_ not modelled 37.2 11 PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate). 24 d1vdda_ not modelled 22.7 22 Fold:Recombination protein RecR Superfamily:Recombination protein RecR Family:Recombination protein RecR 25 c1vddC_ not modelled 20.0 22 PDB header:recombination Chain: C: PDB Molecule:recombination protein recr; PDBTitle: crystal structure of recombinational repair protein recr 26 d1f0ya2 not modelled 18.8 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 27 d1gz0a2 not modelled 17.3 11 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:RNA 2'-O ribose methyltransferase substrate binding domain 28 c2x7mA_ not modelled 17.3 18 PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from methanopyrus2 kandleri at 1.5 a resolution 29 d1f8ya_ not modelled 16.8 6 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:N-deoxyribosyltransferase 30 c1t3gB_ not modelled 16.7 8 PDB header:membrane protein Chain: B: PDB Molecule:x-linked interleukin-1 receptor accessory PDBTitle: crystal structure of the toll/interleukin-1 receptor (tir)2 domain of human il-1rapl 31 c3hu5B_ not modelled 16.5 15 PDB header:hydrolase Chain: B: PDB Molecule:isochorismatase family protein; PDBTitle: crystal structure of isochorismatase family protein from desulfovibrio2 vulgaris subsp. vulgaris str. hildenborough 32 d2bdea1 not modelled 16.0 24 Fold:HAD-like Superfamily:HAD-like Family:5' nucleotidase-like 33 d1s2da_ not modelled 16.0 14 Fold:Flavodoxin-like Superfamily:N-(deoxy)ribosyltransferase-like Family:N-deoxyribosyltransferase 34 d1e8ob_ not modelled 15.8 11 Fold:Signal recognition particle alu RNA binding heterodimer, SRP9/14 Superfamily:Signal recognition particle alu RNA binding heterodimer, SRP9/14 Family:Signal recognition particle alu RNA binding heterodimer, SRP9/14 35 c1b9xC_ not modelled 15.5 21 PDB header:signaling protein Chain: C: PDB Molecule:protein (phosducin); PDBTitle: structural analysis of phosducin and its phosphorylation-2 regulated interaction with transducin 36 c2l82A_ not modelled 15.5 26 PDB header:de novo protein Chain: A: PDB Molecule:designed protein or32; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or32 37 d1x9ga_ not modelled 13.9 14 Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases 38 d1gz0f2 not modelled 13.0 11 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:RNA 2'-O ribose methyltransferase substrate binding domain 39 d1914a2 not modelled 11.5 12 Fold:Signal recognition particle alu RNA binding heterodimer, SRP9/14 Superfamily:Signal recognition particle alu RNA binding heterodimer, SRP9/14 Family:Signal recognition particle alu RNA binding heterodimer, SRP9/14 40 d1j5pa4 not modelled 11.4 9 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 41 c1zrwA_ not modelled 10.9 46 PDB header:antimicrobial protein, antibiotic Chain: A: PDB Molecule:spinigerin; PDBTitle: solution structure of spinigerin in h20/tfe 10% 42 c1zrvA_ not modelled 10.9 46 PDB header:antimicrobial protein, antibiotic Chain: A: PDB Molecule:spinigerin; PDBTitle: solution structure of spinigerin in h20/tfe 50% 43 c2b34C_ not modelled 10.4 16 PDB header:hydrolase Chain: C: PDB Molecule:mar1 ribonuclease; PDBTitle: structure of mar1 ribonuclease from caenorhabditis elegans 44 c2jcmA_ not modelled 10.0 18 PDB header:hydrolase Chain: A: PDB Molecule:cytosolic purine 5'-nucleotidase; PDBTitle: crystal structure of human cytosolic 5'-nucleotidase ii in2 complex with beryllium trifluoride 45 c3gbcA_ not modelled 9.9 17 PDB header:hydrolase Chain: A: PDB Molecule:pyrazinamidase/nicotinamidas pnca; PDBTitle: determination of the crystal structure of the pyrazinamidase from2 m.tuberculosis : a structure-function analysis for prediction3 resistance to pyrazinamide 46 c2r60A_ not modelled 9.4 17 PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii 47 c2jz2A_ not modelled 9.4 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ssl0352 protein; PDBTitle: solution nmr structure of ssl0352 protein from synechocystis sp. pcc2 6803. northeast structural genomics consortium target sgr42 48 d1ldna1 not modelled 9.3 9 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 49 c3l2iB_ not modelled 9.3 8 PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. 50 c2kxeA_ not modelled 9.2 29 PDB header:transferase Chain: A: PDB Molecule:dna polymerase ii small subunit; PDBTitle: n-terminal domain of the dp1 subunit of an archaeal d-family dna2 polymerase 51 c1g4wR_ not modelled 8.9 11 PDB header:signaling protein Chain: R: PDB Molecule:protein tyrosine phosphatase sptp; PDBTitle: crystal structure of the salmonella tyrosine phosphatase2 and gtpase activating protein sptp 52 d1m6ia2 not modelled 8.8 19 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 53 d1guza1 not modelled 8.5 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 54 c3ua4A_ not modelled 8.1 14 PDB header:transferase Chain: A: PDB Molecule:protein arginine n-methyltransferase 5; PDBTitle: crystal structure of protein arginine methyltransferase prmt5 55 c3dy0B_ not modelled 7.9 20 PDB header:blood clotting, hydrolase inhibitor Chain: B: PDB Molecule:c-terminus plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved pci bound to heparin 56 c1xeaD_ not modelled 7.8 8 PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of a gfo/idh/moca family oxidoreductase2 from vibrio cholerae 57 d1ojua1 not modelled 7.7 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 58 d1im5a_ not modelled 7.5 11 Fold:Isochorismatase-like hydrolases Superfamily:Isochorismatase-like hydrolases Family:Isochorismatase-like hydrolases 59 c3gt0A_ not modelled 7.4 12 PDB header:oxidoreductase Chain: A: PDB Molecule:pyrroline-5-carboxylate reductase; PDBTitle: crystal structure of pyrroline 5-carboxylate reductase from bacillus2 cereus. northeast structural genomics consortium target bcr38b 60 c1lq8H_ not modelled 7.4 20 PDB header:blood clotting Chain: H: PDB Molecule:plasma serine protease inhibitor; PDBTitle: crystal structure of cleaved protein c inhibitor 61 d2g8la1 not modelled 7.2 24 Fold:AF1104-like Superfamily:AF1104-like Family:AF1104-like 62 c3oqhB_ not modelled 7.0 16 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein yvmc; PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic 63 d1czan3 not modelled 6.9 22 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 64 d5ldha1 not modelled 6.7 9 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 65 d1x94a_ not modelled 6.4 10 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 66 d1sjpa3 not modelled 6.3 6 Fold:GroEL-intermediate domain like Superfamily:GroEL-intermediate domain like Family:GroEL-like chaperone, intermediate domain 67 d1obba1 not modelled 6.3 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 68 d1llda1 not modelled 6.3 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 69 d1gqna_ not modelled 6.3 6 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 70 c3qufB_ not modelled 6.3 14 PDB header:transport protein Chain: B: PDB Molecule:extracellular solute-binding protein, family 1; PDBTitle: the structure of a family 1 extracellular solute-binding protein from2 bifidobacterium longum subsp. infantis 71 d1ez4a1 not modelled 6.2 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 72 d1u8xx1 not modelled 6.2 13 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 73 d1up7a1 not modelled 6.1 10 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 74 d2zdra2 not modelled 6.1 13 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 75 c1llcA_ not modelled 6.1 14 PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution 76 c2x0dA_ not modelled 6.1 23 PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf 77 d1jjcb4 not modelled 6.1 13 Fold:Ferredoxin-like Superfamily:Anticodon-binding domain of PheRS Family:Anticodon-binding domain of PheRS 78 d1a0rp_ not modelled 6.1 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Phosducin 79 c2v6bB_ not modelled 5.7 7 PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) 80 c2yvaB_ not modelled 5.7 7 PDB header:dna binding protein Chain: B: PDB Molecule:dnaa initiator-associating protein diaa; PDBTitle: crystal structure of escherichia coli diaa 81 c2qupA_ not modelled 5.7 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh1478 protein; PDBTitle: crystal structure of uncharacterized protein bh1478 from bacillus2 halodurans 82 c2krcA_ not modelled 5.6 17 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 83 d4pgaa_ not modelled 5.6 12 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 84 c1a5zA_ not modelled 5.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: lactate dehydrogenase from thermotoga maritima (tmldh) 85 d1llca1 not modelled 5.6 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 86 d1ldma1 not modelled 5.5 12 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:LDH N-terminal domain-like 87 c3js3C_ not modelled 5.5 8 PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate 88 d2dx5a1 not modelled 5.5 19 Fold:PH domain-like barrel Superfamily:PH domain-like Family:VPS36 N-terminal domain-like 89 c3bsmD_ not modelled 5.5 12 PDB header:lyase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens 90 d1x92a_ not modelled 5.4 15 Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain 91 d2bisa1 not modelled 5.4 15 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 92 c1914A_ not modelled 5.3 12 PDB header:alu domain Chain: A: PDB Molecule:signal recognition particle 9/14 fusion protein; PDBTitle: signal recognition particle alu rna binding heterodimer, srp9/14 93 d2p61a1 not modelled 5.3 7 Fold:Four-helical up-and-down bundle Superfamily:TM1646-like Family:TM1646-like 94 c2pr7A_ not modelled 5.3 12 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase/epoxide hydrolase family; PDBTitle: crystal structure of uncharacterized protein (np_599989.1) from2 corynebacterium glutamicum atcc 13032 kitasato at 1.44 a resolution 95 d2bf5a1 not modelled 5.2 14 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 96 c2x3yA_ not modelled 5.2 7 PDB header:isomerase Chain: A: PDB Molecule:phosphoheptose isomerase; PDBTitle: crystal structure of gmha from burkholderia pseudomallei 97 c2aj6A_ not modelled 5.1 19 PDB header:transferase Chain: A: PDB Molecule:hypothetical protein mw0638; PDBTitle: crystal structure of a putative gnat family acetyltransferase (mw0638)2 from staphylococcus aureus subsp. aureus at 1.63 a resolution 98 c2p61A_ not modelled 5.1 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein tm_1646; PDBTitle: crystal structure of protein tm1646 from thermotoga2 maritima, pfam duf327