PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1llcA_

Fold library id	PDB Header	Molecule	Title
c1llcA_	PDB header: oxidoreductase(choh(d)-nad(a))	Chain: A: PDB Molecule: l-lactate dehydrogenase;	PDBTitle: structure determination of the allosteric l-lactate2 dehydrogenase from lactobacillus casei at 3.0 angstroms3 resolution

Links to external resources
Added to library: Tue Mar 16 12:47:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A S I T D K D H Q K V I L V G D G A V G S S Y A F A M V L Q G I A Q E I G I V D I F K D K T K G D A I D L S N A L P F T S P K K I Y S A E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S
T T T
S S
S
S T T S
T T S
B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S D A K D A D L V V I T A G A P K Q P G E T R L D L V N K N L K I L K S I V D P I V D S G F N L I F L V A A N P V D I L T Y A T W K L S G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S
S
B T
S S
S S S
S T T T S T T T T T T T T
S
B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P K N R V V G S G T S L D T A R F R Q S I A E M V N V D A R S V H A Y I M G E H G D T E F P V W S H A N I G G V T I A E W V K A H P E I K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S
T T S
B S S S S S
S T T
S S S S S S
S
S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D K L V K M F E D V R D A A Y E I I K L K G A T F Y G I A T A L A R I S K A I L N D E N A V L P L S V Y M D G Q Y G I N D L Y I G T P A V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S T T T T T T G G G T T T T S S S S S
T T T
S S S S S
S S
B

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320

Sequence N R N G I Q N I L E I P L T D H E E E S M Q K S A S Q L K K V L T D A F A K N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T T T T T T T T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	I	T	D	K	D	H	Q	K	V	I	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	V	L	Q	G	I	A	Q	E	I	G	I	V	D	I	F	K	D	K	T	K	G	D	A	I	D	L	S	N	A	L	P	F	T	S	P	K	K	I	Y	S	A	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S						S		T	T														T			S	S						S		S											T	T	S		T	T	S					B				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	A	K	D	A	D	L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	K	I	L	K	S	I	V	D	P	I	V	D	S	G	F	N	L	I	F	L	V	A	A	N	P	V	D	I	L	T	Y	A	T	W	K	L	S	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	S		S					B	T				S	S		S	S	S		S	T					T	T	S	T	T	T	T	T	T						T	T			S					B		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	K	N	R	V	V	G	S	G	T	S	L	D	T	A	R	F	R	Q	S	I	A	E	M	V	N	V	D	A	R	S	V	H	A	Y	I	M	G	E	H	G	D	T	E	F	P	V	W	S	H	A	N	I	G	G	V	T	I	A	E	W	V	K	A	H	P	E	I	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T					T	T															S				T	T	S							B	S	S	S	S	S										S	T	T			S	S	S	S	S	S		S		S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	K	L	V	K	M	F	E	D	V	R	D	A	A	Y	E	I	I	K	L	K	G	A	T	F	Y	G	I	A	T	A	L	A	R	I	S	K	A	I	L	N	D	E	N	A	V	L	P	L	S	V	Y	M	D	G	Q	Y	G	I	N	D	L	Y	I	G	T	P	A	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S	T	T	T	T	T	T	G	G	G	T	T	T	T	S	S	S	S	S		T	T																	T												S	S	S	S	S			S	S			B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Sequence	N	R	N	G	I	Q	N	I	L	E	I	P	L	T	D	H	E	E	E	S	M	Q	K	S	A	S	Q	L	K	K	V	L	T	D	A	F	A	K	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T								T	T	T	T	T	T	T	T	T	T	T	T	T