Fold library entry viewer: c1xdoB_

Added to library: Tue Mar 16 14:08:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	Q	E	K	L	Y	I	E	K	E	L	S	W	L	S	F	N	E	R	V	L	Q	E	A	A	D	K	S	N	P	L	I	E	R	M	R	F	L	G	I	Y	S	N	N	L	D	E	F	Y	K	V	R	F	A	E	L	K	R	R	I	I	I	S	E	E	Q	G	S	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S																					T	T	S																						T														T	T				S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	S	R	H	L	L	G	K	I	Q	S	R	V	L	K	A	D	Q	E	F	D	G	L	Y	N	E	L	L	L	E	M	A	R	N	Q	I	F	L	I	N	E	R	Q	L	S	V	N	Q	Q	N	W	L	R	H	Y	F	K	Q	Y	L	R	Q	H	I	T	P	I	L	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		T	T						G	G	G			T	T													T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	T	D	L	V	Q	F	L	K	D	D	Y	T	Y	L	A	V	E	I	I	R	G	D	T	I	R	Y	A	L	L	E	I	P	S	D	K	V	P	R	F	V	N	L	P	P	E	A	P	R	R	R	K	P	M	I	L	L	D	N	I	L	R	Y	C	L	D	D	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T	T	T	S		T	T											T	T											T	T	T	S		S								S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	G	F	F	D	Y	D	A	L	N	A	Y	S	M	K	M	T	R	D	A	E	Y	D	L	V	H	E	M	E	A	S	L	M	E	L	M	S	S	S	L	K	Q	R	L	T	A	E	P	V	R	F	V	Y	Q	R	D	M	P	N	A	L	V	E	V	L	R	E	K	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T				S																	T	T	S	S	S		T																S									T	T	S												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	S	R	Y	D	S	I	V	P	G	G	R	Y	H	N	F	K	D	F	I	N	F	P	N	V	G	K	A	N	L	V	N	K	P	L	P	R	L	R	H	I	W	F	D	K	A	Q	F	R	N	G	F	D	A	I	R	E	R	D	V	L	L	Y	Y	P	Y	H	T	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S				G	G	G	G	G	G					S		G	G	G	S							B			G	G	G	G		T	T		S	S								S						T	T	T	B		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	V	L	E	L	L	R	Q	A	S	F	D	P	S	V	L	A	I	K	I	N	I	Y	R	V	A	K	D	S	R	I	I	D	S	M	I	H	A	A	H	N	G	K	K	V	T	V	V	V	E	L	Q	A	R	F	D	E	E	A	N	I	H	W	A	K	R	L	T	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		T	T									S	S			S	S													T										S			S	S			G	G	G	S	S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	V	H	V	I	F	S	A	P	G	L	K	I	H	A	K	L	F	L	I	S	R	K	E	N	G	E	V	V	R	Y	A	H	I	G	T	G	N	F	N	E	K	T	A	R	L	Y	T	D	Y	S	L	L	T	A	D	A	R	I	T	N	E	V	R	R	V	F	N	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								T	T			B												T	T										S	S		S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	N	P	Y	R	P	V	T	F	D	Y	L	M	V	S	P	Q	N	S	R	R	L	L	Y	E	M	V	D	R	E	I	A	N	A	Q	Q	G	L	P	S	G	I	T	L	K	L	N	N	L	V	D	K	G	L	V	D	R	L	Y	A	A	S	S	S	G	V	P	V	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S					S	S					T	T	S	T																T	T	T										S		B															T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	V	R	G	M	C	S	L	I	P	N	L	E	G	I	S	D	N	I	R	A	I	S	I	V	D	R	Y	L	E	H	D	R	V	Y	I	F	E	N	G	G	D	K	K	V	Y	L	S	S	A	D	W	M	T	R	N	I	D	Y	R	I	E	V	A	T	P	L	L	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		B				S			T	T	T	S	T	T									S	S												T	T	S							S			B	S						T	S	B								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Sequence	R	L	K	Q	R	V	L	D	I	I	D	I	L	F	S	D	T	V	K	A	R	Y	I	D	K	E	L	S	N	R	Y	V	P	R	G	N	R	R	K	V	R	A	Q	L	A	I	Y	D	Y	I	K	S	L	E	Q	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T		S	S	S						T	T					B					S	S																	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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