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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2v6bB_

Fold library idPDB HeaderMoleculeTitle
c2v6bB_PDB header: oxidoreductaseChain: B: PDB Molecule: l-lactate dehydrogenase;PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form)


Added to library: Tue Mar 16 11:55:41 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQV
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Known secondary structure (DSSP)


ST

S
SSTT

GGG



GGGGTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VILTAGAESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGSGTVLDSA
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TTS
SSS
TTS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RFRHLMAQHAGVDGTHAHGYVLGEHGDSEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRTYY
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Known secondary structure (DSSP) TS
GGG

BSSSTT

GGG
TTTT


S


 .........220.........230.........240.........250.........260.........270.........280
Sequence GIGAALARITEAVLRDRRAVLTVSAPTPEYGVSLSLPRVVGRQGVLSTLHPKLTGDEQQKLEQSAGVLRG
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Known secondary structure (DSSP) TT



TTTT

TT





 ..
Sequence FK
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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