PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3l2iB_

Fold library id	PDB Header	Molecule	Title
c3l2iB_	PDB header: lyase	Chain: B: PDB Molecule: 3-dehydroquinate dehydratase;	PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate2 dehydratase (arod) from salmonella typhimurium lt2.

Links to external resources
Added to library: Sat Aug 28 21:44:38 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L Y F Q S N A M K T V T V R D L V V G E G A P K I I V S L M G K T I T D V K S E A L A Y R E A D F D I L E W R V D H F A N V T T A E S V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T S S S
S S T T S
S G G G
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E A A G A I R E I I T D K P L L F T F R S A K E G G E Q A L T T G Q Y I D L N R A A V D S G L V D M I D L E L F T G D D E V K A T V G Y A H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G T
S S
S
S G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q H N V A V I M S N H D F H K T P A A E E I V Q R L R K M Q E L G A D I P K I A V M P Q T K A D V L T L L T A T V E M Q E R Y A D R P I I T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
T T
S
S S T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . .

Sequence M S M S K T G V I S R L A G E V F G S A A T F G A V G Q I S V A D L R T V L T I L H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G T
B
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	Y	F	Q	S	N	A	M	K	T	V	T	V	R	D	L	V	V	G	E	G	A	P	K	I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T					T	T				T	S	S	S										S	S												T	T	S			S						G	G	G		T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y	I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S									G	G	G	T		S	S																		S			S						G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	Q	T	K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										S	S																		T	T		S									S	S																		T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Sequence	M	S	M	S	K	T	G	V	I	S	R	L	A	G	E	V	F	G	S	A	A	T	F	G	A	V	G	Q	I	S	V	A	D	L	R	T	V	L	T	I	L	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	G	G	G	T																	B					B