Email l.a.kelley@imperial.ac.uk Description P0ABA6 Date Thu Jan 5 11:15:03 GMT 2012 Unique Job ID ac2c120262b84381

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3oaaO_ 100.0 100 PDB header:hydrolase/transport protein Chain: O: PDB Molecule:atp synthase gamma chain; PDBTitle: structure of the e.coli f1-atp synthase inhibited by subunit epsilon 2 c2xokG_ 100.0 24 PDB header:hydrolase Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial; PDBTitle: refined structure of yeast f1c10 atpase complex to 3 a2 resolution 3 d1fs0g_ 100.0 99 Fold:Pyruvate kinase C-terminal domain-like Superfamily:ATP synthase (F1-ATPase), gamma subunit Family:ATP synthase (F1-ATPase), gamma subunit 4 d2jdig1 100.0 39 Fold:Pyruvate kinase C-terminal domain-like Superfamily:ATP synthase (F1-ATPase), gamma subunit Family:ATP synthase (F1-ATPase), gamma subunit 5 c2qe7G_ 100.0 42 PDB header:hydrolase Chain: G: PDB Molecule:atp synthase subunit gamma; PDBTitle: crystal structure of the f1-atpase from the thermoalkaliphilic2 bacterium bacillus sp. ta2.a1 6 c2w6jG_ 100.0 41 PDB header:hydrolase Chain: G: PDB Molecule:atp synthase subunit gamma, mitochondrial; PDBTitle: low resolution structures of bovine mitochondrial f1-atpase2 during controlled dehydration: hydration state 5. 7 c3fksY_ 100.0 32 PDB header:hydrolase Chain: Y: PDB Molecule:atp synthase subunit gamma, mitochondrial; PDBTitle: yeast f1 atpase in the absence of bound nucleotides 8 d1mabg_ 100.0 51 Fold:Pyruvate kinase C-terminal domain-like Superfamily:ATP synthase (F1-ATPase), gamma subunit Family:ATP synthase (F1-ATPase), gamma subunit 9 c3re1B_ 75.0 8 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthetase; PDBTitle: crystal structure of uroporphyrinogen iii synthase from pseudomonas2 syringae pv. tomato dc3000 10 d1wd7a_ 61.9 18 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 11 c3mw8A_ 61.7 9 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: crystal structure of an uroporphyrinogen-iii synthase (sama_3255) from2 shewanella amazonensis sb2b at 1.65 a resolution 12 c3d8tB_ 60.4 15 PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase 13 c2qzuA_ 59.4 13 PDB header:hydrolase Chain: A: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of the putative sulfatase yidj from bacteroides2 fragilis. northeast structural genomics consortium target bfr123 14 d1fsua_ 54.0 15 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Arylsulfatase 15 c3b5qB_ 54.0 18 PDB header:hydrolase Chain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution 16 d1hdha_ 49.2 27 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Arylsulfatase 17 c2xr9A_ 46.8 21 PDB header:hydrolase Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family PDBTitle: crystal structure of autotaxin (enpp2) 18 c2kilA_ 44.1 15 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: nmr structure of the h103g mutant so2144 h-nox domain from2 shewanella oneidensis in the fe(ii)co ligation state 19 d1qw2a_ 43.7 29 Fold:Hypothetical protein Ta1206 Superfamily:Hypothetical protein Ta1206 Family:Hypothetical protein Ta1206 20 c3k8vB_ 42.9 13 PDB header:structural protein Chain: B: PDB Molecule:flagellin homolog; PDBTitle: crysatl structure of a bacterial cell-surface flagellin n20c20 21 c2xrgA_ not modelled 41.8 21 PDB header:hydrolase Chain: A: PDB Molecule:ectonucleotide pyrophosphatase/phosphodiesterase family PDBTitle: crystal structure of autotaxin (enpp2) in complex with the2 ha155 boronic acid inhibitor 22 d1auka_ not modelled 39.0 11 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Arylsulfatase 23 d1p49a_ not modelled 37.2 17 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Arylsulfatase 24 c3p9zA_ not modelled 36.5 15 PDB header:ligase Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd); PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695 25 c2zktB_ not modelled 33.9 14 PDB header:isomerase Chain: B: PDB Molecule:2,3-bisphosphoglycerate-independent phosphoglycerate PDBTitle: structure of ph0037 protein from pyrococcus horikoshii 26 c3ed4A_ not modelled 32.3 10 PDB header:transferase Chain: A: PDB Molecule:arylsulfatase; PDBTitle: crystal structure of putative arylsulfatase from escherichia coli 27 c2p1lF_ not modelled 32.0 39 PDB header:apoptosis Chain: F: PDB Molecule:beclin 1; PDBTitle: structure of the bcl-xl:beclin 1 complex 28 c2w8dB_ not modelled 27.6 11 PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis 29 c3q3qA_ not modelled 27.5 15 PDB header:hydrolase Chain: A: PDB Molecule:alkaline phosphatase; PDBTitle: crystal structure of spap: an novel alkaline phosphatase from2 bacterium sphingomonas sp. strain bsar-1 30 d2pk8a1 not modelled 26.8 14 Fold:Hypothetical protein PF0899 Superfamily:Hypothetical protein PF0899 Family:Hypothetical protein PF0899 31 c2vqrA_ not modelled 25.9 16 PDB header:hydrolase Chain: A: PDB Molecule:putative sulfatase; PDBTitle: crystal structure of a phosphonate monoester hydrolase2 from rhizobium leguminosarum: a new member of the3 alkaline phosphatase superfamily 32 c3dvuC_ not modelled 24.7 39 PDB header:viral protein/apoptosis Chain: C: PDB Molecule:beclin-1; PDBTitle: crystal structure of the complex of murine gamma-2 herpesvirus 68 bcl-2 homolog m11 and the beclin 1 bh33 domain 33 d1sfea2 not modelled 24.2 42 Fold:Ribonuclease H-like motif Superfamily:Methylated DNA-protein cysteine methyltransferase domain Family:Methylated DNA-protein cysteine methyltransferase domain 34 c1o98A_ not modelled 24.2 15 PDB header:isomerase Chain: A: PDB Molecule:2,3-bisphosphoglycerate-independent PDBTitle: 1.4a crystal structure of phosphoglycerate mutase from2 bacillus stearothermophilus complexed with3 2-phosphoglycerate 35 c2i09A_ not modelled 23.8 12 PDB header:isomerase Chain: A: PDB Molecule:phosphopentomutase; PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans 36 c3lzcA_ not modelled 23.8 23 PDB header:biosynthetic protein Chain: A: PDB Molecule:dph2; PDBTitle: crystal structure of dph2 from pyrococcus horikoshii 37 d2fefa1 not modelled 22.6 32 Fold:Bromodomain-like Superfamily:PA2201 N-terminal domain-like Family:PA2201 N-terminal domain-like 38 c2w5tA_ not modelled 22.6 13 PDB header:transferase Chain: A: PDB Molecule:processed glycerol phosphate lipoteichoic acid PDBTitle: structure-based mechanism of lipoteichoic acid synthesis by2 staphylococcus aureus ltas. 39 c3lxqB_ not modelled 22.4 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a 40 c2iucB_ not modelled 19.7 13 PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 41 d1o98a2 not modelled 18.2 15 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain 42 c3m8yC_ not modelled 17.6 10 PDB header:isomerase Chain: C: PDB Molecule:phosphopentomutase; PDBTitle: phosphopentomutase from bacillus cereus after glucose-1,6-bisphosphate2 activation 43 c2ponA_ not modelled 17.3 39 PDB header:apoptosis inhibitor Chain: A: PDB Molecule:beclin-1; PDBTitle: solution structure of the bcl-xl/beclin-1 complex 44 d1tlla2 not modelled 17.1 22 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Cytochrome p450 reductase N-terminal domain-like 45 c3o3xA_ not modelled 16.4 34 PDB header:viral protein Chain: A: PDB Molecule:gp41-5; PDBTitle: crystal structure of gp41-5, a single-chain 5-helix-bundle based on2 hiv gp41 46 d1kxpd3 not modelled 16.2 21 Fold:Serum albumin-like Superfamily:Serum albumin-like Family:Serum albumin-like 47 d1ewsa_ not modelled 14.7 50 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 48 c3cseA_ not modelled 14.4 20 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrofolate reductase; PDBTitle: candida glabrata dihydrofolate reductase complexed with2 nadph and 2,4-diamino-5-(3-(2,5-dimethoxyphenyl)prop-1-3 ynyl)-6-ethylpyrimidine (ucp120b) 49 c3cu2A_ not modelled 14.4 9 PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution 50 d2i09a1 not modelled 13.9 13 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:DeoB catalytic domain-like 51 d1u55a_ not modelled 13.7 14 Fold:Ligand-binding domain in the NO signalling and Golgi transport Superfamily:Ligand-binding domain in the NO signalling and Golgi transport Family:H-NOX domain 52 d1q77a_ not modelled 13.3 19 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 53 c2dg2D_ not modelled 13.0 10 PDB header:protein binding Chain: D: PDB Molecule:apolipoprotein a-i binding protein; PDBTitle: crystal structure of mouse apolipoprotein a-i binding2 protein 54 c2k2dA_ not modelled 12.9 25 PDB header:metal binding protein Chain: A: PDB Molecule:ring finger and chy zinc finger domain- PDBTitle: solution nmr structure of c-terminal domain of human pirh2.2 northeast structural genomics consortium (nesg) target ht2c 55 c2o0cB_ not modelled 12.4 15 PDB header:signaling protein Chain: B: PDB Molecule:alr2278 protein; PDBTitle: crystal structure of the h-nox domain from nostoc sp. pcc 71202 complexed to no 56 d2gqfa1 not modelled 10.5 57 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:HI0933 N-terminal domain-like 57 c3lmaC_ not modelled 10.1 15 PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. 58 c1jr2A_ not modelled 10.0 18 PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase 59 d1jr2a_ not modelled 10.0 18 Fold:HemD-like Superfamily:HemD-like Family:HemD-like 60 c3k8wA_ not modelled 9.9 13 PDB header:structural protein Chain: A: PDB Molecule:flagellin homolog; PDBTitle: crysatl structure of a bacterial cell-surface flagellin n20c45 61 d2z06a1 not modelled 9.9 29 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TTHA0625-like 62 d1h3ob_ not modelled 9.7 15 Fold:Histone-fold Superfamily:Histone-fold Family:TBP-associated factors, TAFs 63 d1v10a3 not modelled 9.3 40 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 64 c1hucC_ not modelled 9.3 57 PDB header:thiol protease Chain: C: PDB Molecule:cathepsin b; PDBTitle: the refined 2.15 angstroms x-ray crystal structure of human2 liver cathepsin b: the structural basis for its specificity 65 d1yf2a2 not modelled 8.8 13 Fold:DNA methylase specificity domain Superfamily:DNA methylase specificity domain Family:Type I restriction modification DNA specificity domain 66 d1m2da_ not modelled 8.8 19 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioredoxin-like 2Fe-2S ferredoxin 67 d1jeya2 not modelled 8.7 10 Fold:vWA-like Superfamily:vWA-like Family:Ku70 subunit N-terminal domain 68 c3opyG_ not modelled 8.6 15 PDB header:transferase Chain: G: PDB Molecule:6-phosphofructo-1-kinase alpha-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 69 c1skhA_ not modelled 8.4 67 PDB header:unknown function Chain: A: PDB Molecule:major prion protein 2; PDBTitle: n-terminal (1-30) of bovine prion protein 70 c2yruA_ not modelled 8.4 8 PDB header:apoptosis Chain: A: PDB Molecule:steroid receptor rna activator 1; PDBTitle: solution structure of mouse steroid receptor rna activator2 1 (sra1) protein 71 c3mxzA_ not modelled 8.2 21 PDB header:chaperone Chain: A: PDB Molecule:tubulin-specific chaperone a; PDBTitle: crystal structure of tubulin folding cofactor a from arabidopsis2 thaliana 72 c3opyH_ not modelled 8.2 18 PDB header:transferase Chain: H: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 73 c3opyB_ not modelled 8.2 18 PDB header:transferase Chain: B: PDB Molecule:6-phosphofructo-1-kinase beta-subunit; PDBTitle: crystal structure of pichia pastoris phosphofructokinase in the t-2 state 74 c2bpoA_ not modelled 8.1 12 PDB header:reductase Chain: A: PDB Molecule:nadph-cytochrom p450 reductase; PDBTitle: crystal structure of the yeast cpr triple mutant: d74g,2 y75f, k78a. 75 c3igzB_ not modelled 8.0 18 PDB header:isomerase Chain: B: PDB Molecule:cofactor-independent phosphoglycerate mutase; PDBTitle: crystal structures of leishmania mexicana phosphoglycerate2 mutase at low cobalt concentration 76 c2ohcB_ not modelled 7.9 38 PDB header:hydrolase Chain: B: PDB Molecule:trna-splicing endonuclease; PDBTitle: structural and mutational analysis of trna-intron splicing2 endonuclease from thermoplasma acidophilum dsm1728 77 c2cseW_ not modelled 7.7 45 PDB header:virus Chain: W: PDB Molecule:major core protein lambda 1; PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution 78 c3k1qB_ not modelled 7.5 36 PDB header:virus Chain: B: PDB Molecule:vp3a, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics 79 c1ew2A_ not modelled 7.4 4 PDB header:hydrolase Chain: A: PDB Molecule:phosphatase; PDBTitle: crystal structure of a human phosphatase 80 d1zeda1 not modelled 7.4 4 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Alkaline phosphatase 81 c3d33B_ not modelled 7.3 27 PDB header:unknown function Chain: B: PDB Molecule:domain of unknown function with an immunoglobulin-like PDBTitle: crystal structure of a duf3244 family protein with an immunoglobulin-2 like beta-sandwich fold (bvu_0276) from bacteroides vulgatus atcc3 8482 at 1.70 a resolution 82 c2oipE_ not modelled 7.0 14 PDB header:transferase, oxidoreductase Chain: E: PDB Molecule:chain a, crystal structure of dhfr; PDBTitle: crystal structure of the s290g active site mutant of ts-2 dhfr from cryptosporidium hominis 83 c1ihqA_ not modelled 7.0 33 PDB header:de novo protein Chain: A: PDB Molecule:chimeric peptide glytm1bzip: tropomyosin alpha PDBTitle: glytm1bzip: a chimeric peptide model of the n-terminus of a2 rat short alpha tropomyosin with the n-terminus encoded by3 exon 1b 84 c2i6sA_ not modelled 7.0 8 PDB header:hydrolase Chain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a 85 c3k1qC_ not modelled 6.9 36 PDB header:virus Chain: C: PDB Molecule:vp3b, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics 86 c3n39D_ not modelled 6.7 9 PDB header:oxidoreductase Chain: D: PDB Molecule:protein nrdi; PDBTitle: ribonucleotide reductase dimanganese(ii)-nrdf from escherichia coli in2 complex with nrdi 87 d1y6va1 not modelled 6.5 12 Fold:Alkaline phosphatase-like Superfamily:Alkaline phosphatase-like Family:Alkaline phosphatase 88 d1t70a_ not modelled 6.5 29 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like 89 d1fpza_ not modelled 6.5 14 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 90 d1ucua_ not modelled 6.5 21 Fold:Phase 1 flagellin Superfamily:Phase 1 flagellin Family:Phase 1 flagellin 91 c1jpeA_ not modelled 6.0 43 PDB header:electron transport Chain: A: PDB Molecule:dsbd-alpha; PDBTitle: crystal structure of dsbd-alpha; the n-terminal domain of2 dsbd 92 d1l6pa_ not modelled 6.0 43 Fold:Immunoglobulin-like beta-sandwich Superfamily:Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) Family:Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha) 93 c3rg9A_ not modelled 5.9 16 PDB header:oxidoreductase/oxidoreductase inhibitor Chain: A: PDB Molecule:bifunctional dihydrofolate reductase-thymidylate synthase; PDBTitle: trypanosoma brucei dihydrofolate reductase (tbdhfr) in complex with2 wr99210 94 d1c0aa2 not modelled 5.8 13 Fold:DCoH-like Superfamily:GAD domain-like Family:GAD domain 95 c2fo1D_ not modelled 5.8 18 PDB header:gene regulation/signalling protein/dna Chain: D: PDB Molecule:protein lag-3; PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna 96 d2fo1d1 not modelled 5.8 18 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Lag-3 N-terminal region Family:Lag-3 N-terminal region 97 d1xo1a2 not modelled 5.8 22 Fold:PIN domain-like Superfamily:PIN domain-like Family:5' to 3' exonuclease catalytic domain 98 c2j63B_ not modelled 5.7 43 PDB header:lyase Chain: B: PDB Molecule:ap-endonuclease; PDBTitle: crystal structure of ap endonuclease lmap from leishmania2 major 99 c2kxoA_ not modelled 5.7 12 PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae