Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2ohcB_

Fold library idPDB HeaderMoleculeTitle
c2ohcB_PDB header: hydrolaseChain: B: PDB Molecule: trna-splicing endonuclease;PDBTitle: structural and mutational analysis of trna-intron splicing2 endonuclease from thermoplasma acidophilum dsm1728


Added to library: Tue Mar 16 12:41:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQGICGSHVFFIEDGKSKNYIIGKYKIGYLSGDNLILDPYECLYLYFKGRISFQNSDSFRDLFDTVTFDR
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

TTSTT



SSSSS

TTTSSSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YVAYEILKNKGYRVKEDSGLIYFRKGTEKPLSLRVMREYDRIQFSDLVENPVDYYFTVDEEGDPTVYSSQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) T

SSSTTS



TT
B




S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EIFPGGRNLVSPVSAPVVRMGGRSFGAGDLEWWIGTAFHGFRLLTENEANYISGNHSASQVDMVYSDLVG
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)














TT
TTS
TTSSTT
TT
TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RGCIVKTGFKYGANFRVYLGRDSQHAEYLVSVMPEEERWYSISRGVRVASSVRKTMIYASIYKNEVRYVA
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TT

GGGTSS
STT
SS
S

SS
BTT
TT
 ........
Sequence LKRVKDII
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D