Fold library entry viewer: d1auka_

Added to library: Tue Mar 16 14:28:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	P	P	N	I	V	L	I	F	A	D	D	L	G	Y	G	D	L	G	C	Y	G	H	P	S	S	T	T	P	N	L	D	Q	L	A	A	G	G	L	R	F	T	D	F	Y	V	P	V	S	L	T	P	S	R	A	A	L	L	T	G	R	L	P	V	R	M	G	M	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S			T	T	T	S	G	G	G	T		S	S												T	S				S	S				S	S												S	S		G	G	G	G	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	V	L	V	P	S	S	R	G	G	L	P	L	E	E	V	T	V	A	E	V	L	A	A	R	G	Y	L	T	G	M	A	G	K	W	H	L	G	V	G	P	E	G	A	F	L	P	P	H	Q	G	F	H	R	F	L	G	I	P	Y	S	H	D	Q	G	P	C	Q	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T	B	S		B	S		T	T	S									T	T	T											S	B			G	G	G	T	T	S	G	G	G	G	T		S						S	S		T	T	S	S	B		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	C	F	P	P	A	T	P	C	D	G	G	C	D	Q	G	L	V	P	I	P	L	L	A	N	L	S	V	E	A	Q	P	P	W	L	P	G	L	E	A	R	Y	M	A	F	A	H	D	L	M	A	D	A	Q	R	Q	D	R	P	F	F	L	Y	Y	A	S	H	H	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T				T	T		B	S		S	S								T	T					B	S			G	G	G																			T	T											T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	P	Q	F	S	G	Q	S	F	A	E	R	S	G	R	G	P	F	G	D	S	L	M	E	L	D	A	A	V	G	T	L	M	T	A	I	G	D	L	G	L	L	E	E	T	L	V	I	F	T	A	D	N	G	P	E	T	M	R	M	S	R	G	G	C	S	G	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					T	T	T	T	T	T	S	S	S																								T	T		G	G	G								S	S				G	G	G	G	G	G	S				T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	G	K	G	T	T	Y	E	G	G	V	R	E	P	A	L	A	F	W	P	G	H	I	A	P	G	V	T	H	E	L	A	S	S	L	D	L	L	P	T	L	A	A	L	A	G	A	P	L	P	N	V	T	L	D	G	F	D	L	S	P	L	L	L	G	T	G	K	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	S					B								T	T	T	S		S					S				G	G	G										T					S	S			S										T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	Q	S	L	F	F	Y	P	S	Y	P	D	E	V	R	G	V	F	A	V	R	T	G	K	Y	K	A	H	F	F	T	Q	G	S	A	H	S	D	T	T	A	D	P	A	C	H	A	S	S	S	L	T	A	H	E	P	P	L	L	Y	D	L	S	K	D	P	G	E	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			T	T	T			S					T	T											G	G	G	T	T	S	S		G	G	G	S	T	T	S													T	T	T		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence	N	L	L	G	A	T	P	E	V	L	Q	A	L	K	Q	L	Q	L	L	K	A	Q	L	D	A	A	V	T	F	G	P	S	Q	V	A	R	G	E	D	P	A	L	Q	I	C	C	H	P	G	C	T	P	R	P	A	C	C	H	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																														S	G	G	G		B		G	G	G	S			S	S	T	T		S	S	T	T	T	T			B

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PDB structure

FASTA sequence

Hidden Markov model

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