PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3p9zA_

Fold library id	PDB Header	Molecule	Title
c3p9zA_	PDB header: ligase	Chain: A: PDB Molecule: uroporphyrinogen iii cosynthase (hemd);	PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695

Links to external resources
Added to library: Sat Nov 6 11:59:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X R E I V W V H S Q R I A P Y K T L I L N E F C Y Y P L E L D P T P F N A L I F T S K N A V F S L L E T L K N S P K L K X L Q N I P A Y A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S
S
T T
S S
T T T
T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S E P T A K T L Q D H H F K V A F X G E E I F P L L E K K S V L Y L R A K E I V S S L D T I L L E H G I D F K Q A V V Y E N K L K H L T L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
B
T T
S S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E Q N A L K P K E K S I L I F T A I S H A K A F L H Y F E F L E N Y T A I S I G N T T A L Y L Q E Q G I P S Y I A K K P S L E A C L E L A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
T T
S S T T
S S S S

. . .

Sequence S L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	R	E	I	V	W	V	H	S	Q	R	I	A	P	Y	K	T	L	I	L	N	E	F	C	Y	Y	P	L	E	L	D	P	T	P	F	N	A	L	I	F	T	S	K	N	A	V	F	S	L	L	E	T	L	K	N	S	P	K	L	K	X	L	Q	N	I	P	A	Y	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S			T	T	S															S			T	T		S					S												T	T	T									T	S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	E	P	T	A	K	T	L	Q	D	H	H	F	K	V	A	F	X	G	E	E	I	F	P	L	L	E	K	K	S	V	L	Y	L	R	A	K	E	I	V	S	S	L	D	T	I	L	L	E	H	G	I	D	F	K	Q	A	V	V	Y	E	N	K	L	K	H	L	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T			B												T	T									S	S		S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	N	A	L	K	P	K	E	K	S	I	L	I	F	T	A	I	S	H	A	K	A	F	L	H	Y	F	E	F	L	E	N	Y	T	A	I	S	I	G	N	T	T	A	L	Y	L	Q	E	Q	G	I	P	S	Y	I	A	K	K	P	S	L	E	A	C	L	E	L	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			T	T							S											S				T	T						S	S										T	T							S	S	S	S
	.	.	.
Sequence	S	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T