Fold library entry viewer: c3opyG_

Added to library: Tue Oct 19 11:43:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	S	D	L	S	F	T	S	F	V	T	N	D	D	N	L	F	E	E	T	F	N	F	Y	T	K	L	G	F	H	A	T	R	S	Y	V	K	N	R	S	D	F	E	L	T	G	I	S	D	S	I	K	E	I	W	L	E	S	F	P	L	S	E	V	V	E	A	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									S															T	T																S							S										B				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	R	K	P	L	Q	E	S	V	G	Y	E	S	E	A	L	L	G	Y	P	Y	Q	G	G	V	V	I	K	L	R	L	S	N	E	K	N	N	D	L	P	G	E	V	T	F	F	T	A	S	I	D	K	L	K	A	K	L	I	E	I	G	A	E	I	I	P	S	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B				T	T	S	T	T					S	S	S				B																			S								S												S	S			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	E	F	S	T	R	D	P	M	G	D	V	I	S	F	S	S	Y	P	S	L	S	K	K	I	T	S	P	D	F	E	G	K	K	K	I	A	I	I	T	S	G	G	D	A	P	G	M	N	A	A	V	R	A	V	T	R	A	G	I	F	Y	G	C	K	V	Y	A	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S								S	S	S						S								S									S	S			T	T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	G	Y	T	G	L	V	K	G	G	D	M	L	K	E	L	Q	W	Q	D	V	R	G	L	L	S	I	G	G	T	I	I	G	T	A	R	C	K	E	F	R	E	R	W	G	R	L	Q	A	C	Y	N	M	V	S	N	G	I	D	A	L	V	V	C	G	G	D	G	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S		S	T	T						T	T	T	T	T	T	G	G	G			S		S	S					S	S	S	T	T	S														T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	A	D	L	F	R	K	E	W	P	E	L	I	K	E	K	E	Q	Y	E	T	H	R	N	L	T	I	V	G	L	V	G	S	I	D	N	D	M	C	G	T	D	S	T	I	G	A	Y	S	S	L	E	R	I	I	E	L	V	D	Y	I	D	A	T	A	A	S	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T												T	T	S										S	S				T	T		S																					S	S				T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	A	F	V	V	E	V	M	G	R	H	C	G	W	L	G	L	M	S	G	I	A	T	G	A	D	Y	I	F	I	P	E	R	P	P	S	E	S	N	W	K	D	D	L	K	K	V	C	L	R	H	R	E	K	G	R	R	K	T	T	V	I	V	A	E	G	A	I	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		T											T		S					T	T	S				T	T	T															T	T										T	T		B		T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	L	N	P	I	T	S	E	E	V	K	D	V	L	V	E	I	G	L	D	T	R	I	T	R	L	G	H	V	Q	R	G	G	A	P	C	A	F	D	R	F	L	A	T	V	Q	G	V	D	A	V	R	A	V	L	E	S	T	P	A	I	P	S	P	V	I	S	I	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		B												T	T	T									G	G	G	G	G		S																							T			T	T	S								S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	K	I	V	R	Q	P	L	V	E	S	V	A	Q	T	K	T	V	S	A	A	I	E	A	K	D	F	D	K	A	L	Q	L	R	D	Q	E	F	A	T	S	Y	E	N	F	L	S	V	S	K	Y	D	D	G	S	Y	L	V	P	E	S	S	R	L	N	I	A	I	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																						T	T								T	S																G	G	G	G	S	S	S				G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	G	A	P	T	S	A	L	N	P	A	T	R	V	A	T	L	N	S	L	A	K	G	H	R	V	F	A	I	R	N	G	F	A	G	L	I	R	H	G	A	V	R	E	L	N	W	I	D	V	E	D	W	H	N	T	G	G	S	E	I	G	T	N	R	S	L	P	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			T	T															T	T							T	T																T	T	T	T	T	T	T	T	T			S		S	S			B				G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	M	G	T	V	A	Y	Y	F	Q	Q	Y	K	F	D	G	L	I	I	I	G	G	F	E	A	F	T	A	L	Y	E	L	D	A	A	R	A	Q	Y	P	I	F	N	I	P	M	C	C	L	P	A	T	V	S	N	N	V	P	G	T	E	Y	S	L	G	S	D	T	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G												T		S							S														T	T	T		G	G	G		S							B		S	S				T	T		S			B	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	T	L	S	G	Y	C	D	A	V	K	Q	S	A	S	S	R	R	R	T	F	V	V	E	V	Q	G	G	Y	S	G	Y	L	A	S	Y	A	G	L	I	T	G	A	L	A	V	Y	T	P	E	N	P	I	N	L	Q	T	V	Q	E	D	I	E	L	L	T	R	T	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T					S									T	T		S											T		S					T	T	S																			T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	D	D	R	S	G	K	I	F	I	H	N	E	K	A	S	K	V	Y	T	T	D	L	I	A	A	I	I	G	E	A	G	K	G	R	F	E	S	R	T	A	V	P	G	H	V	Q	Q	G	K	S	P	S	S	I	D	R	V	N	A	C	R	L	A	I	K	C	C	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	S	S		S	S	S												T	T	T	T	T	S								G	G	G	G	G		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	E	D	A	N	F	Q	V	K	H	N	A	N	L	S	A	D	E	R	H	L	R	F	F	Y	D	D	G	V	K	T	S	A	V	S	G	K	S	S	V	I	D	D	N	T	S	V	V	I	G	I	Q	G	S	E	V	T	F	T	P	V	K	Q	L	W	E	N	E	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		G	G	G	S			S	S	S										T					T	T					T	T	T			S					G	G	G								T	T														S		T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.
Sequence	H	K	W	N	V	H	W	E	Q	L	N	I	V	S	D	L	L	S	G	R	L	S	I	R	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																S	S					T	T

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PDB structure

FASTA sequence

Hidden Markov model

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