Emaill.a.kelley@imperial.ac.uk
DescriptionP0AAA9
DateThu Jan 5 11:12:24 GMT 2012
Unique Job ID694373eff02fad96

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3layF_



99.8 71 PDB header:metal binding protein
Chain: F: PDB Molecule:zinc resistance-associated protein;
PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2
2c3epvB_



99.3 16 PDB header:metal binding protein
Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr;
PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms
3c3qzcA_



99.0 17 PDB header:signaling protein
Chain: A: PDB Molecule:periplasmic protein cpxp;
PDBTitle: structure of the periplasmic stress response protein cpxp
4c3oeoD_



98.9 17 PDB header:signaling protein
Chain: D: PDB Molecule:spheroplast protein y;
PDBTitle: the crystal structure e. coli spy
5c3o39A_



98.9 17 PDB header:chaperone
Chain: A: PDB Molecule:periplasmic protein related to spheroblast formation;
PDBTitle: crystal structure of spy
6c3itfA_



98.9 14 PDB header:signaling protein
Chain: A: PDB Molecule:periplasmic adaptor protein cpxp;
PDBTitle: structural basis for the inhibitory function of the cpxp adaptor2 protein
7d1gqea_



83.6 22 Fold:Release factor
Superfamily:Release factor
Family:Release factor
8c1j1eC_



78.7 17 PDB header:contractile protein
Chain: C: PDB Molecule:troponin i;
PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form
9c2w6aB_



77.0 20 PDB header:signaling protein
Chain: B: PDB Molecule:arf gtpase-activating protein git1;
PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain
10c2gl2B_



75.4 15 PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada
11c1ei3E_



73.7 5 PDB header:
PDB COMPND:
12c3ojaB_



72.3 15 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
13c3ghgK_



70.9 8 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
14c1deqF_



68.7 12 PDB header:
PDB COMPND:
15c3bt6B_



68.0 21 PDB header:viral protein
Chain: B: PDB Molecule:influenza b hemagglutinin (ha);
PDBTitle: crystal structure of influenza b virus hemagglutinin
16c2ke4A_



67.8 16 PDB header:membrane protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
17c1deqO_



67.7 8 PDB header:
PDB COMPND:
18c3hnwB_



67.3 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
19d1cuna2



67.1 16 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
20c1yv0I_



66.8 21 PDB header:contractile protein
Chain: I: PDB Molecule:troponin i, fast skeletal muscle;
PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state
21c2gd7B_



not modelled 63.5 12 PDB header:transcription
Chain: B: PDB Molecule:hexim1 protein;
PDBTitle: the structure of the cyclin t-binding domain of hexim12 reveals the molecular basis for regulation of3 transcription elongation
22d1s35a2



not modelled 63.4 16 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
23c3kltB_



not modelled 59.4 13 PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment
24c2w9yA_



not modelled 53.6 12 PDB header:lipid transport
Chain: A: PDB Molecule:fatty acid/retinol binding protein protein 7,
PDBTitle: the structure of the lipid binding protein ce-far-7 from2 caenorhabditis elegans
25c2iakA_



not modelled 53.3 16 PDB header:cell adhesion
Chain: A: PDB Molecule:bullous pemphigoid antigen 1, isoform 5;
PDBTitle: crystal structure of a protease resistant fragment of the plakin2 domain of bullous pemphigoid antigen1 (bpag1)
26d2spca_



not modelled 51.1 19 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
27c2v7sA_



not modelled 50.2 19 PDB header:unknown function
Chain: A: PDB Molecule:probable conserved lipoprotein lppa;
PDBTitle: crystal structure of the putative lipoprotein lppa from2 mycobacterium tuberculosis
28d2oeza1



not modelled 49.1 23 Fold:YacF-like
Superfamily:YacF-like
Family:YacF-like
29c2jo8B_



not modelled 49.0 10 PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase 4;
PDBTitle: solution structure of c-terminal domain of human mammalian2 sterile 20-like kinase 1 (mst1)
30c3m9bK_



not modelled 48.1 17 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
31d1vqov1



not modelled 48.0 17 Fold:Long alpha-hairpin
Superfamily:Ribosomal protein L29 (L29p)
Family:Ribosomal protein L29 (L29p)
32c2a3dA_



not modelled 46.5 23 PDB header:three-helix bundle
Chain: A: PDB Molecule:protein (de novo three-helix bundle);
PDBTitle: solution structure of a de novo designed single chain three-2 helix bundle (a3d)
33c3d5cX_



not modelled 46.5 17 PDB header:ribosome
Chain: X: PDB Molecule:peptide chain release factor 1;
PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400.
34c3ls1A_



not modelled 45.4 18 PDB header:photosynthesis
Chain: A: PDB Molecule:sll1638 protein;
PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+
35d1quua1



not modelled 44.3 16 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
36c1wpaA_



not modelled 42.6 17 PDB header:cell adhesion
Chain: A: PDB Molecule:occludin;
PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522
37c1xzqA_



not modelled 40.9 13 PDB header:hydrolase
Chain: A: PDB Molecule:probable trna modification gtpase trme;
PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf
38c2xdjF_



not modelled 40.8 12 PDB header:unknown function
Chain: F: PDB Molecule:uncharacterized protein ybgf;
PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
39c2js5B_



not modelled 40.1 21 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of protein q60c73_metca. northeast structural2 genomics consortium target mcr1
40d1u5pa1



not modelled 39.7 16 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
41c2fxmB_



not modelled 38.5 10 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
42c1deqD_



not modelled 38.3 17 PDB header:
PDB COMPND:
43c2j375_



not modelled 38.1 16 PDB header:ribosome
Chain: 5: PDB Molecule:ribosomal protein l35;
PDBTitle: model of mammalian srp bound to 80s rncs
44c2eqbC_



not modelled 38.0 13 PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
45d1u5pa2



not modelled 37.8 14 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
46c3kbtA_



not modelled 37.4 13 PDB header:structural protein
Chain: A: PDB Molecule:spectrin beta chain, erythrocyte;
PDBTitle: crystal structure of the ankyrin binding domain of human erythroid2 beta spectrin (repeats 13-15) in complex with the spectrin binding3 domain of human erythroid ankyrin (zu5-ank)
47d1s35a1



not modelled 36.4 9 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
48d1cxzb_



not modelled 36.3 14 Fold:Long alpha-hairpin
Superfamily:HR1 repeat
Family:HR1 repeat
49c3hizB_



not modelled 36.2 15 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
50c2oszA_



not modelled 35.8 10 PDB header:structural protein
Chain: A: PDB Molecule:nucleoporin p58/p45;
PDBTitle: structure of nup58/45 suggests flexible nuclear pore diameter by2 intermolecular sliding
51c2c5iT_



not modelled 35.7 20 PDB header:protein transport
Chain: T: PDB Molecule:t-snare affecting a late golgi compartment
PDBTitle: n-terminal domain of tlg1 complexed with n-terminus of2 vps51 in distorted conformation
52c2p2uA_



not modelled 35.4 15 PDB header:dna binding protein
Chain: A: PDB Molecule:host-nuclease inhibitor protein gam, putative;
PDBTitle: crystal structure of putative host-nuclease inhibitor2 protein gam from desulfovibrio vulgaris
53c2zkrv_



not modelled 34.2 11 PDB header:ribosomal protein/rna
Chain: V: PDB Molecule:rna expansion segment es9 part2;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
54c3csxA_



not modelled 33.4 18 PDB header:metal binding protein,unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: structural characterization of a protein in the duf6832 family- crystal structure of cce_0567 from the3 cyanobacterium cyanothece 51142.
55d1st6a3



not modelled 32.3 19 Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
56c3ol1A_



not modelled 30.7 8 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
57d1uklc_



not modelled 30.6 22 Fold:HLH-like
Superfamily:HLH, helix-loop-helix DNA-binding domain
Family:HLH, helix-loop-helix DNA-binding domain
58d1olma1



not modelled 29.8 17 Fold:RuvA C-terminal domain-like
Superfamily:CRAL/TRIO N-terminal domain
Family:CRAL/TRIO N-terminal domain
59c3f31B_



not modelled 29.4 17 PDB header:actin binding, structural protein
Chain: B: PDB Molecule:spectrin alpha chain, brain;
PDBTitle: crystal structure of the n-terminal region of alphaii-spectrin2 tetramerization domain
60c3m0dC_



not modelled 29.4 13 PDB header:signaling protein
Chain: C: PDB Molecule:tnf receptor-associated factor 1;
PDBTitle: crystal structure of the traf1:traf2:ciap2 complex
61c2ihr1_



not modelled 28.8 26 PDB header:translation
Chain: 1: PDB Molecule:peptide chain release factor 2;
PDBTitle: rf2 of thermus thermophilus
62c3gehA_



not modelled 28.7 16 PDB header:hydrolase
Chain: A: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
63c3hfdA_



not modelled 28.6 9 PDB header:chaperone, protein transport
Chain: A: PDB Molecule:nucleosome assembly protein 1;
PDBTitle: nucleosome assembly protein 1 from plasmodium knowlesi
64c2j8pA_



not modelled 27.9 22 PDB header:nuclear protein
Chain: A: PDB Molecule:cleavage stimulation factor 64 kda subunit;
PDBTitle: nmr structure of c-terminal domain of human cstf-64
65c3fs3A_



not modelled 27.3 11 PDB header:chaperone
Chain: A: PDB Molecule:nucleosome assembly protein 1, putative;
PDBTitle: crystal structure of malaria parasite nucleosome assembly protein2 (nap)
66c2an7A_



not modelled 26.9 15 PDB header:dna binding protein
Chain: A: PDB Molecule:protein pard;
PDBTitle: solution structure of the bacterial antidote pard
67c3ni0A_



not modelled 26.9 20 PDB header:immune system
Chain: A: PDB Molecule:bone marrow stromal antigen 2;
PDBTitle: crystal structure of mouse bst-2/tetherin ectodomain
68c1xawA_



not modelled 26.6 19 PDB header:cell adhesion
Chain: A: PDB Molecule:occludin;
PDBTitle: crystal structure of the cytoplasmic distal c-terminal2 domain of occludin
69c1s35A_



not modelled 26.4 16 PDB header:structural protein
Chain: A: PDB Molecule:spectrin beta chain, erythrocyte;
PDBTitle: crystal structure of repeats 8 and 9 of human erythroid2 spectrin
70d1st6a4



not modelled 26.0 27 Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
71d1ydxa1



not modelled 25.6 13 Fold:DNA methylase specificity domain
Superfamily:DNA methylase specificity domain
Family:Type I restriction modification DNA specificity domain
72c3bhpA_



not modelled 25.5 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:upf0291 protein ynzc;
PDBTitle: crystal structure of upf0291 protein ynzc from bacillus2 subtilis at resolution 2.0 a. northeast structural3 genomics consortium target sr384
73d1akha_



not modelled 25.4 7 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Homeodomain
74c3ghgD_



not modelled 25.0 15 PDB header:blood clotting
Chain: D: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of human fibrinogen
75d1lvaa3



not modelled 24.7 5 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:C-terminal fragment of elongation factor SelB
76c2no2A_



not modelled 24.5 14 PDB header:cell adhesion
Chain: A: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
77c3u59C_



not modelled 24.3 10 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
78c3qh9A_



not modelled 23.9 13 PDB header:structural protein
Chain: A: PDB Molecule:liprin-beta-2;
PDBTitle: human liprin-beta2 coiled-coil
79d1ykhb1



not modelled 23.7 16 Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
80d1hcia4



not modelled 23.5 12 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
81c3m5gD_



not modelled 22.4 16 PDB header:viral protein
Chain: D: PDB Molecule:hemagglutinin;
PDBTitle: crystal structure of a h7 influenza virus hemagglutinin
82c2nrjA_



not modelled 22.2 14 PDB header:toxin
Chain: A: PDB Molecule:hbl b protein;
PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus
83c3a7mA_



not modelled 21.9 12 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:flagellar protein flit;
PDBTitle: structure of flit, the flagellar type iii chaperone for flid
84c2q9qC_



not modelled 21.9 16 PDB header:replication
Chain: C: PDB Molecule:dna replication complex gins protein psf1;
PDBTitle: the crystal structure of full length human gins complex
85c2jeeA_



not modelled 21.8 14 PDB header:cell cycle
Chain: A: PDB Molecule:yiiu;
PDBTitle: xray structure of e. coli yiiu
86c2xusA_



not modelled 21.6 20 PDB header:protein binding
Chain: A: PDB Molecule:breast cancer metastasis-suppressor 1;
PDBTitle: crystal structure of the brms1 n-terminal region
87c1jccC_



not modelled 21.5 11 PDB header:membrane protein
Chain: C: PDB Molecule:major outer membrane lipoprotein;
PDBTitle: crystal structure of a novel alanine-zipper trimer at 1.7 a2 resolution, v13a,l16a,v20a,l23a,v27a,m30a,v34a mutations
88d2e9xa1



not modelled 21.5 16 Fold:GINS helical bundle-like
Superfamily:GINS helical bundle-like
Family:PSF1 N-terminal domain-like
89c2v6lI_



not modelled 21.3 20 PDB header:protein transport
Chain: I: PDB Molecule:mxih;
PDBTitle: molecular model of a type iii secretion system needle
90c1gk6B_



not modelled 21.3 10 PDB header:vimentin
Chain: B: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b)
91c1m1jA_



not modelled 21.2 17 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
92c1avyA_



not modelled 20.0 30 PDB header:coiled coil
Chain: A: PDB Molecule:fibritin;
PDBTitle: fibritin deletion mutant m (bacteriophage t4)
93c3geiB_



not modelled 19.8 18 PDB header:hydrolase
Chain: B: PDB Molecule:trna modification gtpase mnme;
PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp
94d2hgq11



not modelled 19.7 13 Fold:Long alpha-hairpin
Superfamily:Ribosomal protein L29 (L29p)
Family:Ribosomal protein L29 (L29p)
95c1cunC_



not modelled 19.7 16 PDB header:structural protein
Chain: C: PDB Molecule:protein (alpha spectrin);
PDBTitle: crystal structure of repeats 16 and 17 of chicken brain2 alpha spectrin
96c3b7qA_



not modelled 19.4 19 PDB header:signaling protein
Chain: A: PDB Molecule:uncharacterized protein ykl091c;
PDBTitle: crystal structure of yeast sec14 homolog sfh1 in complex with2 phosphatidylcholine
97c1ox3A_



not modelled 19.2 26 PDB header:chaperone
Chain: A: PDB Molecule:fibritin;
PDBTitle: crystal structure of mini-fibritin
98c1stzB_



not modelled 18.7 18 PDB header:transcription
Chain: B: PDB Molecule:heat-inducible transcription repressor hrca homolog;
PDBTitle: crystal structure of a hypothetical protein at 2.2 a resolution
99c1jsdB_



not modelled 18.6 18 PDB header:viral protein
Chain: B: PDB Molecule:haemagglutinin (ha2 chain);
PDBTitle: crystal structure of swine h9 haemagglutinin