PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3hfdA_

Fold library id	PDB Header	Molecule	Title
c3hfdA_	PDB header: chaperone, protein transport	Chain: A: PDB Molecule: nucleosome assembly protein 1;	PDBTitle: nucleosome assembly protein 1 from plasmodium knowlesi

Links to external resources
Added to library: Sat Aug 28 17:20:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T D L T E E Q K E T L K K L K L Y Q K E Y Y D Y E S K F E Y E L F L L R Q K Y H D L Y G P I Y D K R R E A L V G N G E A K I G T P N L P E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S S S S T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W L R A L R N N N T V S H V I E D H D E E I L V Y L N D I R C D Y I K K E G F I L S F H F A P N P F F S N S V L T K T Y H M K P V L L H T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
T T
S
S S B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T V I D W Y D N K N I L K K N V V K V Q Q T V N R D S F F H F F T S H K V P E V A Q L E M I I E G D Y E V A L T I K E R I I P Y A V D Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
T T S
G G G G S
B
T

. . . .

Sequence L G I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	D	L	T	E	E	Q	K	E	T	L	K	K	L	K	L	Y	Q	K	E	Y	Y	D	Y	E	S	K	F	E	Y	E	L	F	L	L	R	Q	K	Y	H	D	L	Y	G	P	I	Y	D	K	R	R	E	A	L	V	G	N	G	E	A	K	I	G	T	P	N	L	P	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																							T			S			S	S	S	S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	L	R	A	L	R	N	N	N	T	V	S	H	V	I	E	D	H	D	E	E	I	L	V	Y	L	N	D	I	R	C	D	Y	I	K	K	E	G	F	I	L	S	F	H	F	A	P	N	P	F	F	S	N	S	V	L	T	K	T	Y	H	M	K	P	V	L	L	H	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S					T	T										T	T																						S		S	S	B			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	V	I	D	W	Y	D	N	K	N	I	L	K	K	N	V	V	K	V	Q	Q	T	V	N	R	D	S	F	F	H	F	F	T	S	H	K	V	P	E	V	A	Q	L	E	M	I	I	E	G	D	Y	E	V	A	L	T	I	K	E	R	I	I	P	Y	A	V	D	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B		T	T			T	T	S															G	G	G	G	S			B																									T
	.	.	.	.
Sequence	L	G	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T