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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1xzqA_

Fold library idPDB HeaderMoleculeTitle
c1xzqA_PDB header: hydrolaseChain: A: PDB Molecule: probable trna modification gtpase trme;PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf


Added to library: Tue Mar 16 14:19:00 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DTIVAVATPPGKGAIAILRLSGPDSWKIVQKHLRTRSKIVPRKAIHGWIHENGEDVDEVVVVFYKSPKSY
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Known secondary structure (DSSP)


S
SS

SB

SSTTT
SS


TT

SSSS
SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TGEDMVEVMCHGGPLVVKKLLDLFLKSGARMAEPGEFTKRAFLNGKMDLTSAEAVRDLIEAKSETSLKLS
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Known secondary structure (DSSP) SSS

B
STTT


BTTTSS
T

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRNLKGGLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELKKADAGILLNRG
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Known secondary structure (DSSP) TTT
SSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLG
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Known secondary structure (DSSP)

TTGGGSTB








S

S

TTSS


SS

SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVK
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Known secondary structure (DSSP)
SSSS


GGGSS
SS


S
TS
STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ISALKGEGLEKLEESIYRETQEIFERGSDSLITNLRQKQLLENVKGHLEDAIKSLKEGMPVDMASIDLER
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Known secondary structure (DSSP) TTTT

TTT
S

STT

 .........430.........440.........
Sequence ALNLLDEVTGRSFREDLLDTIFSNFCVGK
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Known secondary structure (DSSP) TSS

TS
BT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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