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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1jsdB_

Fold library idPDB HeaderMoleculeTitle
c1jsdB_PDB header: viral proteinChain: B: PDB Molecule: haemagglutinin (ha2 chain);PDBTitle: crystal structure of swine h9 haemagglutinin


Added to library: Tue Mar 16 14:04:29 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GLFGAIAGFIEGGWPGLVAGWYGFQHSNDQGVGMAADSDSTQKAIDKITSKVNNIVDKMNKQYGIIDHEF
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Known secondary structure (DSSP)
TTSTBTTTB



TT

S
SSTT











 .........80.........90.........100.........110.........120.........130.........140
Sequence SEIETRLNMINNKIDDQIQDIWTYNAELLVLLENQKTLDEHDANVNNLYNKVKRALGSNAMEDGKGCFEL
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Known secondary structure (DSSP)
TT
GGG
SSS
 .........150.........160
Sequence YHKCDDQCMETIRNGTYNRR
Predicted secondary structure





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Known secondary structure (DSSP) SS


TT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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