Email l.a.kelley@imperial.ac.uk Description P33790 Date Thu Jan 5 11:52:39 GMT 2012 Unique Job ID 65ab397f58c1a679

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ghgK_ 88.0 11 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 2 c1ei3E_ 85.0 6 PDB header: PDB COMPND: 3 c3ojaB_ 83.3 8 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 4 c1deqO_ 82.7 14 PDB header: PDB COMPND: 5 c1deqF_ 80.7 6 PDB header: PDB COMPND: 6 c3cwgA_ 74.9 6 PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment 7 c1ei3C_ 72.1 6 PDB header: PDB COMPND: 8 c1bf5A_ 59.3 4 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 9 c2kr6A_ 49.2 10 PDB header:hydrolase Chain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit 10 c2a5yA_ 47.1 12 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator ced-9; PDBTitle: structure of a ced-4/ced-9 complex 11 c1bg1A_ 38.5 5 PDB header:transcription/dna Chain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex 12 c1f5nA_ 27.9 9 PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. 13 c1ciiA_ 27.5 8 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 14 c2k8jX_ 27.0 31 PDB header:viral protein Chain: X: PDB Molecule:p7tm2; PDBTitle: solution structure of hcv p7 tm2 15 d1ji6a3 23.6 16 Fold:Toxins' membrane translocation domains Superfamily:delta-Endotoxin (insectocide), N-terminal domain Family:delta-Endotoxin (insectocide), N-terminal domain 16 c1b9uA_ 19.7 24 PDB header:hydrolase Chain: A: PDB Molecule:protein (atp synthase); PDBTitle: membrane domain of the subunit b of the e.coli atp synthase 17 d1r3jc_ 17.4 6 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 18 c1mhsA_ 16.8 10 PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase 19 d1o0la_ 16.5 9 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 20 c3dtpA_ 15.2 6 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 21 c1yvlB_ not modelled 14.4 6 PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 22 d2r6gf1 not modelled 13.8 15 Fold:MalF N-terminal region-like Superfamily:MalF N-terminal region-like Family:MalF N-terminal region-like 23 c1g8xB_ not modelled 13.7 6 PDB header:structural protein Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor 24 c2xa0A_ not modelled 13.7 11 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide 25 c2eceA_ not modelled 13.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:462aa long hypothetical selenium-binding protein; PDBTitle: x-ray structure of hypothetical selenium-binding protein2 from sulfolobus tokodaii, st0059 26 c2wpqA_ not modelled 12.8 7 PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion) 27 c2ki9A_ not modelled 12.7 30 PDB header:membrane protein Chain: A: PDB Molecule:cannabinoid receptor 2; PDBTitle: human cannabinoid receptor-2 helix 6 28 d2i5nl1 not modelled 12.0 11 Fold:Bacterial photosystem II reaction centre, L and M subunits Superfamily:Bacterial photosystem II reaction centre, L and M subunits Family:Bacterial photosystem II reaction centre, L and M subunits 29 c3ifxB_ not modelled 10.9 9 PDB header:membrane protein Chain: B: PDB Molecule:voltage-gated potassium channel; PDBTitle: crystal structure of the spin-labeled kcsa mutant v48r1 30 c2yv6A_ not modelled 10.7 20 PDB header:apoptosis Chain: A: PDB Molecule:bcl-2 homologous antagonist/killer; PDBTitle: crystal structure of human bcl-2 family protein bak 31 c1ma1E_ not modelled 10.4 19 PDB header:oxidoreductase Chain: E: PDB Molecule:superoxide dismutase; PDBTitle: structure and properties of the atypical iron superoxide2 dismutase from methanobacterium thermoautotrophicum 32 c2rddB_ not modelled 10.4 30 PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix. 33 c2nybC_ not modelled 9.8 10 PDB header:oxidoreductase Chain: C: PDB Molecule:superoxide dismutase [fe]; PDBTitle: crystal structure of e.coli iron superoxide dismutase q69e2 at 1.1 angstrom resolution 34 d1rh1a2 not modelled 9.7 16 Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin 35 d1vbga3 not modelled 9.7 6 Fold:ATP-grasp Superfamily:Glutathione synthetase ATP-binding domain-like Family:Pyruvate phosphate dikinase, N-terminal domain 36 c1y67D_ not modelled 9.5 10 PDB header:oxidoreductase Chain: D: PDB Molecule:manganese superoxide dismutase; PDBTitle: crystal structure of manganese superoxide dismutase from2 deinococcus radiodurans 37 c1kkcB_ not modelled 9.4 10 PDB header:oxidoreductase Chain: B: PDB Molecule:manganese superoxide dismutase; PDBTitle: crystal structure of aspergillus fumigatus mnsod 38 d1y9ia_ not modelled 9.3 9 Fold:YutG-like Superfamily:YutG-like Family:YutG-like 39 c3k07A_ not modelled 9.3 8 PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa 40 c1jchC_ not modelled 9.2 8 PDB header:ribosome inhibitor, hydrolase Chain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein 41 c2o2fA_ not modelled 9.2 11 PDB header:apoptosis Chain: A: PDB Molecule:apoptosis regulator bcl-2; PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand 42 d1uerc2 not modelled 9.1 14 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 43 c1avmA_ not modelled 9.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: the cambialistic superoxide dismutase (fe-sod) of p. shermanii2 coordinated by azide 44 d1wb8a2 not modelled 8.9 14 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 45 d1bm8a_ not modelled 8.9 8 Fold:DNA-binding domain of Mlu1-box binding protein MBP1 Superfamily:DNA-binding domain of Mlu1-box binding protein MBP1 Family:DNA-binding domain of Mlu1-box binding protein MBP1 46 c3js4C_ not modelled 8.8 14 PDB header:oxidoreductase Chain: C: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of iron superoxide dismutase from anaplasma2 phagocytophilum 47 d1zy3a1 not modelled 8.8 9 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 48 c2cw2B_ not modelled 8.7 19 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase 1; PDBTitle: crystal structure of superoxide dismutase from p. marinus 49 c1qnnD_ not modelled 8.6 14 PDB header:oxidoreductase Chain: D: PDB Molecule:superoxide dismutase; PDBTitle: cambialistic superoxide dismutase from porphyromonas2 gingivalis 50 c3rg9A_ not modelled 8.5 33 PDB header:oxidoreductase/oxidoreductase inhibitor Chain: A: PDB Molecule:bifunctional dihydrofolate reductase-thymidylate synthase; PDBTitle: trypanosoma brucei dihydrofolate reductase (tbdhfr) in complex with2 wr99210 51 d2q7ra1 not modelled 8.4 10 Fold:MAPEG domain-like Superfamily:MAPEG domain-like Family:MAPEG domain 52 c1n0nB_ not modelled 8.2 14 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase [mn]; PDBTitle: catalytic and structural effects of amino-acid substitution at his302 in human manganese superoxide dismutase 53 c3lj9A_ not modelled 8.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:iron superoxide dismutase; PDBTitle: x-ray structure of the iron superoxide dismutase from2 pseudoalteromonas haloplanktis in complex with sodium azide 54 c2gpcB_ not modelled 8.1 10 PDB header:oxidoreductase Chain: B: PDB Molecule:iron superoxide dismutase; PDBTitle: the crystal structure of the enzyme fe-superoxide dismutase2 from trypanosoma cruzi 55 c3l9oA_ not modelled 8.0 8 PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome 56 c3ceiA_ not modelled 8.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from helicobacter2 pylori 57 c3kdpG_ not modelled 7.9 12 PDB header:hydrolase Chain: G: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the sodium-potassium pump 58 c3kdpH_ not modelled 7.9 12 PDB header:hydrolase Chain: H: PDB Molecule:na+/k+ atpase gamma subunit transcript variant a; PDBTitle: crystal structure of the sodium-potassium pump 59 c3tqjB_ not modelled 7.9 14 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase [fe]; PDBTitle: structure of the superoxide dismutase (fe) (sodb) from coxiella2 burnetii 60 c2a03A_ not modelled 7.8 5 PDB header:oxidoreductase Chain: A: PDB Molecule:fe-superoxide dismutase homolog; PDBTitle: superoxide dismutase protein from plasmodium berghei 61 c3nnqA_ not modelled 7.8 3 PDB header:viral protein Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3 62 c1p7gL_ not modelled 7.7 14 PDB header:oxidoreductase Chain: L: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from pyrobaculum2 aerophilum 63 d1ma1a2 not modelled 7.6 19 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 64 c1gv3B_ not modelled 7.6 14 PDB header:manganese superoxide dismutase Chain: B: PDB Molecule:manganese superoxide dismutase; PDBTitle: the 2.0 angstrom resolution structure of the catalytic2 portion of a cyanobacterial membrane-bound manganese3 superoxide dismutase 65 d1y67a2 not modelled 7.5 10 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 66 d1b06a2 not modelled 7.5 10 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 67 c2rcvA_ not modelled 7.5 19 PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase [mn]; PDBTitle: crystal structure of the bacillus subtilis superoxide2 dismutase 68 c2kncB_ not modelled 7.5 26 PDB header:cell adhesion Chain: B: PDB Molecule:integrin beta-3; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex 69 c2y6xA_ not modelled 7.5 13 PDB header:photosynthesis Chain: A: PDB Molecule:photosystem ii 11 kd protein; PDBTitle: structure of psb27 from thermosynechococcus elongatus 70 c1unfX_ not modelled 7.5 24 PDB header:oxidoreductase Chain: X: PDB Molecule:iron superoxide dismutase; PDBTitle: the crystal structure of the eukaryotic fesod from vigna2 unguiculata suggests a new enzymatic mechanism 71 d1bxla_ not modelled 7.4 9 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 72 c3prqT_ not modelled 7.3 18 PDB header:photosynthesis Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 1 of 2). this file contains first monomer of psii3 dimer 73 c3bz1T_ not modelled 7.3 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 12 of 2). this file contains first monomer of psii dimer 74 c3bz2T_ not modelled 7.3 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of cyanobacterial photosystem ii (part 22 of 2). this file contains second monomer of psii dimer 75 c3prrT_ not modelled 7.3 18 PDB header:photosynthesis Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of cyanobacterial photosystem ii in complex with2 terbutryn (part 2 of 2). this file contains second monomer of psii3 dimer 76 c3a0bT_ not modelled 7.3 15 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of br-substituted photosystem ii complex 77 c3arct_ not modelled 7.3 15 PDB header:electron transport, photosynthesis Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 78 c1dt0A_ not modelled 7.3 5 PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: cloning, sequence, and crystallographic structure of2 recombinant iron superoxide dismutase from pseudomonas3 ovalis 79 c1en4C_ not modelled 7.3 14 PDB header:oxidoreductase Chain: C: PDB Molecule:manganese superoxide dismutase; PDBTitle: crystal structure analysis of the e. coli manganese2 superoxide dismutase q146h mutant 80 c1gn4B_ not modelled 7.3 19 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase; PDBTitle: h145e mutant of mycobacterium tuberculosis iron-superoxide2 dismutase. 81 c1s5lT_ not modelled 7.2 18 PDB header:photosynthesis Chain: T: PDB Molecule:photosystem ii psbt protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 82 c1s5lt_ not modelled 7.2 18 PDB header:photosynthesis Chain: T: PDB Molecule:photosystem ii psbt protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 83 c2cw3A_ not modelled 7.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:iron superoxide dismutase; PDBTitle: x-ray structure of pmsod2, superoxide dismutase from2 perkinsus marinus 84 c1sseB_ not modelled 7.2 11 PDB header:transcription activator Chain: B: PDB Molecule:ap-1 like transcription factor yap1; PDBTitle: solution structure of the oxidized form of the yap1 redox2 domain 85 d1uera2 not modelled 7.2 14 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 86 d2axtt1 not modelled 7.2 18 Fold:Single transmembrane helix Superfamily:Photosystem II reaction center protein T, PsbT Family:PsbT-like 87 c3a0bt_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of br-substituted photosystem ii complex 88 c2axtT_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center t protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 89 c2axtt_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center t protein; PDBTitle: crystal structure of photosystem ii from thermosynechococcus elongatus 90 c3arcT_ not modelled 7.2 18 PDB header:electron transport, photosynthesis Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of oxygen-evolving photosystem ii at 1.9 angstrom2 resolution 91 c3a0ht_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of i-substituted photosystem ii complex 92 c3kziT_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of monomeric form of cyanobacterial photosystem ii 93 c3a0hT_ not modelled 7.2 18 PDB header:electron transport Chain: T: PDB Molecule:photosystem ii reaction center protein t; PDBTitle: crystal structure of i-substituted photosystem ii complex 94 d1p7ga2 not modelled 7.1 14 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 95 d1juva_ not modelled 7.1 40 Fold:Dihydrofolate reductase-like Superfamily:Dihydrofolate reductase-like Family:Dihydrofolate reductases 96 d1pq1a_ not modelled 7.0 9 Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death 97 c2i88A_ not modelled 7.0 14 PDB header:membrane protein Chain: A: PDB Molecule:colicin-e1; PDBTitle: crystal structure of the channel-forming domain of colicin2 e1 98 d1kkca2 not modelled 6.9 10 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 99 c3h1sB_ not modelled 6.9 19 PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from francisella tularensis2 subsp. tularensis schu s4