PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2i88A_

Fold library id	PDB Header	Molecule	Title
c2i88A_	PDB header: membrane protein	Chain: A: PDB Molecule: colicin-e1;	PDBTitle: crystal structure of the channel-forming domain of colicin2 e1

Links to external resources
Added to library: Tue Mar 16 12:30:40 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I K D A V D A T V S F Y Q T L T E K Y G E K Y S K M A Q E L A D K S K G K K I G N V N E A L A A F E K Y K D V L N K K F S K A D R D A I F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L A S V K Y D D W A K H L D Q F A K Y L K I T G H V S F G Y D V V S D I L K I K D T G D W K P L F L T L E K K A A D A G V S Y V V A L L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T T
S
T T
G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . .

Sequence S L L A G T T L G I W G I A I V T G I L C S Y I D K N K L N T I N E V L G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	K	D	A	V	D	A	T	V	S	F	Y	Q	T	L	T	E	K	Y	G	E	K	Y	S	K	M	A	Q	E	L	A	D	K	S	K	G	K	K	I	G	N	V	N	E	A	L	A	A	F	E	K	Y	K	D	V	L	N	K	K	F	S	K	A	D	R	D	A	I	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S																T	T																							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	A	S	V	K	Y	D	D	W	A	K	H	L	D	Q	F	A	K	Y	L	K	I	T	G	H	V	S	F	G	Y	D	V	V	S	D	I	L	K	I	K	D	T	G	D	W	K	P	L	F	L	T	L	E	K	K	A	A	D	A	G	V	S	Y	V	V	A	L	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			T					T	T								T	T			S				T	T																												G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Sequence	S	L	L	A	G	T	T	L	G	I	W	G	I	A	I	V	T	G	I	L	C	S	Y	I	D	K	N	K	L	N	T	I	N	E	V	L	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																			S	S												T