Email l.a.kelley@imperial.ac.uk Description P31979 Date Thu Jan 5 11:48:55 GMT 2012 Unique Job ID 6055bc112678ce3b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2fugA_ 100.0 46 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 2 d2fug12 100.0 54 Fold:Nqo1 FMN-binding domain-like Superfamily:Nqo1 FMN-binding domain-like Family:Nqo1 FMN-binding domain-like 3 d2fug11 100.0 32 Fold:Bromodomain-like Superfamily:Nqo1C-terminal domain-like Family:Nqo1C-terminal domain-like 4 d2fug13 99.9 43 Fold:beta-Grasp (ubiquitin-like) Superfamily:Nqo1 middle domain-like Family:Nqo1 middle domain-like 5 c2w8iG_ 93.2 18 PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345. 6 c2j58G_ 91.9 18 PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza 7 c1c4cA_ 78.1 11 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 8 c3p42D_ 65.8 13 PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon 9 d2bs2b1 46.1 20 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 10 c3swrA_ 44.3 36 PDB header:transferase Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: structure of human dnmt1 (601-1600) in complex with sinefungin 11 c2b76N_ 43.9 16 PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation 12 c2bs2E_ 42.1 20 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 13 d1kf6b1 41.3 17 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 14 c3bqqB_ 37.7 7 PDB header:lipid binding protein Chain: B: PDB Molecule:proactivator polypeptide; PDBTitle: crystal structure of human saposin d (triclinic) 15 c1ffuA_ 36.7 17 PDB header:hydrolase Chain: A: PDB Molecule:cuts, iron-sulfur protein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava which lacks the mo-pyranopterin moiety of the3 molybdenum cofactor 16 c2h89B_ 36.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound 17 c3bl5E_ 35.9 19 PDB header:hydrolase Chain: E: PDB Molecule:queuosine biosynthesis protein quec; PDBTitle: crystal structure of quec from bacillus subtilis: an enzyme2 involved in preq1 biosynthesis 18 d1nkla_ 35.3 12 Fold:Saposin-like Superfamily:Saposin Family:NKL-like 19 c3pt6B_ 32.4 36 PDB header:transferase/dna Chain: B: PDB Molecule:dna (cytosine-5)-methyltransferase 1; PDBTitle: crystal structure of mouse dnmt1(650-1602) in complex with dna 20 d1zxia1 28.2 21 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 21 d1of9a_ not modelled 28.2 13 Fold:Saposin-like Superfamily:Saposin Family:Ameobapore A 22 c3thdD_ not modelled 25.2 26 PDB header:hydrolase Chain: D: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of human beta-galactosidase in complex with 1-2 deoxygalactonojirimycin 23 d1n62a1 not modelled 24.3 20 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 24 c3cf4A_ not modelled 23.2 23 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 25 c1dgjA_ not modelled 22.6 14 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: crystal structure of the aldehyde oxidoreductase from2 desulfovibrio desulfuricans atcc 27774 26 c3d3aA_ not modelled 22.3 26 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: crystal structure of a beta-galactosidase from bacteroides2 thetaiotaomicron 27 c1w59B_ not modelled 21.7 27 PDB header:cell division Chain: B: PDB Molecule:cell division protein ftsz homolog 1; PDBTitle: ftsz dimer, empty (m. jannaschii) 28 c3b9jI_ not modelled 21.6 22 PDB header:oxidoreductase Chain: I: PDB Molecule:xanthine oxidase; PDBTitle: structure of xanthine oxidase with 2-hydroxy-6-methylpurine 29 d2gtga1 not modelled 20.0 12 Fold:Saposin-like Superfamily:Saposin Family:NKL-like 30 d1nekb1 not modelled 19.9 14 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 31 d1t3qa1 not modelled 18.7 21 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 32 d1v97a1 not modelled 18.4 22 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 33 c2he3A_ not modelled 18.0 9 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2) 34 d1o8xa_ not modelled 18.0 22 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 35 d1z6na1 not modelled 17.9 28 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 36 c1n60D_ not modelled 17.7 20 PDB header:oxidoreductase Chain: D: PDB Molecule:carbon monoxide dehydrogenase small chain; PDBTitle: crystal structure of the cu,mo-co dehydrogenase (codh); cyanide-2 inactivated form 37 c3eubJ_ not modelled 16.8 22 PDB header:oxidoreductase Chain: J: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine 38 d1ujsa_ not modelled 16.1 26 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 39 d2pg3a1 not modelled 16.1 44 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 40 d1deca_ not modelled 16.1 36 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 41 c1nekB_ not modelled 15.9 18 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound 42 d1l9la_ not modelled 15.6 6 Fold:Saposin-like Superfamily:Saposin Family:NKL-like 43 c1rm6F_ not modelled 15.5 20 PDB header:oxidoreductase Chain: F: PDB Molecule:4-hydroxybenzoyl-coa reductase gamma subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica 44 d1uufa1 not modelled 15.1 55 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 45 d1i5ga_ not modelled 15.0 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 46 d1jqoa_ not modelled 14.8 35 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate carboxylase 47 c1jqoA_ not modelled 14.8 35 PDB header:lyase Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize 48 c3nsjA_ not modelled 14.6 24 PDB header:immune system Chain: A: PDB Molecule:perforin-1; PDBTitle: the x-ray crystal structure of lymphocyte perforin 49 d1rm6c1 not modelled 14.2 18 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 50 c3o2qB_ not modelled 13.6 20 PDB header:hydrolase Chain: B: PDB Molecule:rna polymerase ii subunit a c-terminal domain phosphatase PDBTitle: crystal structure of the human symplekin-ssu72-ctd phosphopeptide2 complex 51 c3l23A_ not modelled 13.6 10 PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of sugar phosphate isomerase/epimerase2 (yp_001303399.1) from parabacteroides distasonis atcc 8503 at 1.70 a3 resolution 52 c2w3rG_ not modelled 13.4 15 PDB header:oxidoreductase Chain: G: PDB Molecule:xanthine dehydrogenase; PDBTitle: crystal structure of xanthine dehydrogenase (desulfo form)2 from rhodobacter capsulatus in complex with hypoxanthine 53 d1ejba_ not modelled 13.0 24 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 54 c2ds8A_ not modelled 12.9 35 PDB header:metal binding protein, protein binding Chain: A: PDB Molecule:atp-dependent clp protease atp-binding subunit PDBTitle: structure of the zbd-xb complex 55 c3mk3L_ not modelled 12.9 21 PDB header:transferase Chain: L: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase; PDBTitle: crystal structure of lumazine synthase from salmonella typhimurium lt2 56 c3qmhA_ not modelled 12.8 64 PDB header:dna binding protein/dna Chain: A: PDB Molecule:cpg-binding protein; PDBTitle: structural basis of selective binding of non-methylated cpg islands2 (dna-tcga) by the cxxc domain of cfp1 57 d1c2ya_ not modelled 12.7 11 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 58 c2jyiA_ not modelled 12.7 64 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein hrx; PDBTitle: solution structure of mll cxxc domain 59 c3fdfA_ not modelled 12.5 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:fr253; PDBTitle: crystal structure of the serine phosphatase of rna2 polymerase ii ctd (ssu72 superfamily) from drosophila3 melanogaster. orthorhombic crystal form. northeast4 structural genomics consortium target fr253. 60 c3ogrA_ not modelled 12.1 27 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: complex structure of beta-galactosidase from trichoderma reesei with2 galactose 61 d1ffva1 not modelled 11.8 17 Fold:CO dehydrogenase ISP C-domain like Superfamily:CO dehydrogenase ISP C-domain like Family:CO dehydrogenase ISP C-domain like 62 d1cdoa1 not modelled 11.8 36 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 63 c1t3qD_ not modelled 11.7 21 PDB header:oxidoreductase Chain: D: PDB Molecule:quinoline 2-oxidoreductase small subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86 64 c2l3xA_ not modelled 11.7 21 PDB header:protein binding Chain: A: PDB Molecule:ablim2 protein; PDBTitle: villin head piece domain of human ablim2 65 d1rvv1_ not modelled 11.7 17 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 66 c2bm0A_ not modelled 11.1 15 PDB header:elongation factor Chain: A: PDB Molecule:elongation factor g; PDBTitle: ribosomal elongation factor g (ef-g) fusidic acid resistant2 mutant t84a 67 c2kvgA_ not modelled 11.0 26 PDB header:transcription Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32; PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein 68 d2fa8a1 not modelled 11.0 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related 69 c3hrdH_ not modelled 10.7 22 PDB header:oxidoreductase Chain: H: PDB Molecule:nicotinate dehydrogenase small fes subunit; PDBTitle: crystal structure of nicotinate dehydrogenase 70 c3p04B_ not modelled 10.6 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 71 c2j2sA_ not modelled 10.6 64 PDB header:transcription regulation Chain: A: PDB Molecule:zinc finger protein hrx; PDBTitle: solution structure of the nonmethyl-cpg-binding cxxc domain2 of the leukaemia-associated mll histone methyltransferase 72 d1yu5x1 not modelled 10.3 13 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 73 c2ojlB_ not modelled 10.2 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of q7waf1_borpa from bordetella parapertussis.2 northeast structural genomics target bpr68. 74 c1ovxB_ not modelled 10.2 35 PDB header:metal binding protein Chain: B: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: nmr structure of the e. coli clpx chaperone zinc binding domain dimer 75 d2ds5a1 not modelled 10.2 35 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:ClpX chaperone zinc binding domain 76 d1nqua_ not modelled 10.2 15 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 77 d2vapa1 not modelled 10.1 26 Fold:Tubulin nucleotide-binding domain-like Superfamily:Tubulin nucleotide-binding domain-like Family:Tubulin, GTPase domain 78 c3o2sB_ not modelled 9.9 20 PDB header:hydrolase Chain: B: PDB Molecule:rna polymerase ii subunit a c-terminal domain phosphatase PDBTitle: crystal structure of the human symplekin-ssu72 complex 79 c2p0gB_ not modelled 9.7 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:selenoprotein w-related protein; PDBTitle: crystal structure of selenoprotein w-related protein from2 vibrio cholerae. northeast structural genomics target vcr75 80 c1xc6A_ not modelled 9.6 27 PDB header:hydrolase Chain: A: PDB Molecule:beta-galactosidase; PDBTitle: native structure of beta-galactosidase from penicillium sp. in complex2 with galactose 81 d1mmca_ not modelled 9.6 0 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant lectins/antimicrobial peptides Family:Antimicrobial peptide 2, AC-AMP2 82 c1ogpD_ not modelled 9.3 20 PDB header:oxidoreductase Chain: D: PDB Molecule:sulfite oxidase; PDBTitle: the crystal structure of plant sulfite oxidase provides2 insight into sulfite oxidation in plants and animals 83 d1lbua2 not modelled 8.9 12 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:Muramoyl-pentapeptide carboxypeptidase 84 d1c41a_ not modelled 8.8 17 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 85 d1v9wa_ not modelled 8.8 28 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like 86 d1o73a_ not modelled 8.7 27 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 87 c2obkE_ not modelled 8.5 20 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:selt/selw/selh selenoprotein domain; PDBTitle: x-ray structure of the putative se binding protein from pseudomonas2 fluorescens. northeast structural genomics consortium target plr6. 88 c3p04A_ not modelled 8.5 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized bcr; PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8 89 d1qzpa_ not modelled 8.5 18 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 90 c2h9gS_ not modelled 8.4 25 PDB header:immune system/apoptosis Chain: S: PDB Molecule:tumor necrosis factor receptor superfamily member 10b PDBTitle: crystal structure of phage derived fab bdf1 with human death receptor2 5 (dr5) 91 c3fkfC_ not modelled 8.4 13 PDB header:oxidoreductase Chain: C: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343 92 c1zr6A_ not modelled 8.3 12 PDB header:oxidoreductase Chain: A: PDB Molecule:glucooligosaccharide oxidase; PDBTitle: the crystal structure of an acremonium strictum glucooligosaccharide2 oxidase reveals a novel flavinylation 93 c2obxH_ not modelled 8.1 15 PDB header:transferase Chain: H: PDB Molecule:6,7-dimethyl-8-ribityllumazine synthase 1; PDBTitle: lumazine synthase ribh2 from mesorhizobium loti (gene mll7281, swiss-2 prot entry q986n2) complexed with inhibitor 5-nitro-6-(d-3 ribitylamino)-2,4(1h,3h) pyrimidinedione 94 c3dexA_ not modelled 8.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sav_2001; PDBTitle: crystal structure of sav_2001 protein from streptomyces2 avermitilis, northeast structural genomics consortium3 target svr107. 95 c1zlgA_ not modelled 8.0 31 PDB header:hormone/growth factor Chain: A: PDB Molecule:anosmin 1; PDBTitle: solution structure of the extracellular matrix protein2 anosmin-1 96 d2fzwa1 not modelled 7.9 36 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 97 d1di0a_ not modelled 7.8 17 Fold:Lumazine synthase Superfamily:Lumazine synthase Family:Lumazine synthase 98 c3l0aA_ not modelled 7.8 50 PDB header:hydrolase Chain: A: PDB Molecule:putative exonuclease; PDBTitle: crystal structure of putative exonuclease (rer070207002219) from2 eubacterium rectale at 2.19 a resolution 99 d2f9wa1 not modelled 7.7 23 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:CoaX-like