Fold library entry viewer: c3pt6B_

Added to library: Wed Jan 5 12:25:50 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	K	R	R	R	C	G	V	C	E	V	C	Q	Q	P	E	C	G	K	C	K	A	C	K	D	M	V	K	F	G	G	T	G	R	S	K	Q	A	C	L	K	R	R	C	P	N	L	A	V	K	E	A	D	D	D	E	E	A	D	D	D	V	S	E	M	P	S	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			S	S	S					S				S		S					T	S	G	G	G	T			S		S					G	G	G			T	T		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	H	Q	G	K	K	K	K	Q	N	K	D	R	I	S	W	L	G	Q	P	M	K	I	E	E	N	R	T	Y	Y	Q	K	V	S	I	D	E	E	M	L	E	V	G	D	C	V	S	V	I	P	D	D	S	S	K	P	L	Y	L	A	R	V	T	A	L	W	E	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S									S						S	S		S				S	S					S					T	T					T	T								S	S	S	S	S														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	Q	M	M	F	H	A	H	W	F	C	A	G	T	D	T	V	L	G	A	T	S	D	P	L	E	L	F	L	V	G	E	C	E	N	M	Q	L	S	Y	I	H	S	K	V	K	V	I	Y	K	A	P	S	E	N	W	A	M	E	G	G	D	G	K	T	Y	F	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S												G	G	G	S	T	T	G	G	G	S		T	T													G	G	G														T	T	T	T	T						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	W	Y	N	Q	E	Y	A	R	F	E	S	P	P	K	T	Q	P	T	E	D	N	K	H	K	F	C	L	S	C	I	R	L	A	E	L	R	Q	K	E	M	P	K	V	L	E	Q	I	E	E	V	D	G	R	V	Y	C	S	S	I	T	K	N	G	V	V	Y	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T												T	T	T	T	T	T																S											T	T										T	T					T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	S	V	Y	L	P	P	E	A	F	T	F	N	I	K	V	A	S	P	V	K	R	P	K	K	D	P	V	N	E	T	L	Y	P	E	H	Y	R	K	Y	S	D	Y	I	K	G	S	N	L	D	A	P	E	P	Y	R	I	G	R	I	K	E	I	H	C	G	K	K	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S				S																	T	T	T	S	G	G	G	G	G			S				T	T		G	G	G																			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	V	N	E	A	D	I	K	L	R	L	Y	K	F	Y	R	P	E	N	T	H	R	S	Y	N	G	S	Y	H	T	D	I	N	M	L	Y	W	S	D	E	E	A	V	V	N	F	S	D	V	Q	G	R	C	T	V	E	Y	G	E	D	L	L	E	S	I	Q	D	Y	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G	S	T	T	T	T	T	T	S	S	S	S		T	T													G	G	G										T	T	T		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	G	P	D	R	F	Y	F	L	E	A	Y	N	S	K	T	K	N	F	E	D	P	P	N	H	A	R	S	P	G	N	K	K	L	P	K	L	R	T	L	D	V	F	S	G	C	G	G	L	S	E	G	F	H	Q	A	G	I	S	E	T	L	W	A	I	E	M	W	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S										T	T	T	T							G	G	G	S		S														T		T	T											T										S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	Q	A	F	R	L	N	N	P	G	T	T	V	F	T	E	D	C	N	V	L	L	K	L	V	M	A	G	E	V	T	N	S	L	G	Q	R	L	P	Q	K	G	D	V	E	M	L	C	G	G	P	P	C	Q	G	F	S	G	M	N	R	F	N	S	R	T	Y	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S					S											T	T		S	B		T	T			B				T	T	T		S									T	T	S			S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	K	N	S	L	V	V	S	F	L	S	Y	C	D	Y	Y	R	P	R	F	F	L	L	E	N	V	R	N	F	V	S	Y	R	R	S	M	V	L	K	L	T	L	R	C	L	V	R	M	G	Y	Q	C	T	F	G	V	L	Q	A	G	Q	Y	G	V	A	Q	T	R	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S															S								S	G	G	G	T																	T	T										G	G	G	G	T		S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	I	I	L	A	A	A	P	G	E	K	L	P	L	F	P	E	P	L	H	V	F	A	P	R	A	C	Q	L	S	V	V	V	D	D	K	K	F	V	S	N	I	T	R	L	S	S	G	P	F	R	T	I	T	V	R	D	T	M	S	D	L	P	E	I	Q	N	G	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S										B				G	G	G							S	S	S						S				S	S			S	B										T	T	S					T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	S	E	I	P	Y	N	G	E	P	L	S	W	F	Q	R	Q	L	R	G	S	H	Y	Q	P	I	L	R	D	H	I	C	K	D	M	S	P	L	V	A	A	R	M	R	H	I	P	L	F	P	G	S	D	W	R	D	L	P	N	I	Q	V	R	L	G	D	G	V	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S						S				S									S	S																							T	S		S	S	T	T			G	G	G									T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	H	K	L	Q	Y	T	F	H	D	V	K	N	G	Y	S	S	T	G	A	L	R	G	V	C	S	C	A	E	G	K	A	C	D	P	E	S	R	Q	F	S	T	L	I	P	W	C	L	P	H	T	G	N	R	H	N	H	W	A	G	L	Y	G	R	L	E	W	D	G	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B						B		B	T	T	T	B	B		T	T			B		B	S	S	G	G	G	T	T	S				T	T	S				S	B	S	S		T						T	G	G	G	G	G	G	T	T	T	T					T	T	S		B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	T	T	V	T	N	P	E	P	M	G	K	Q	G	R	V	L	H	P	E	Q	H	R	V	V	S	V	R	E	C	A	R	S	Q	G	F	P	D	S	Y	R	F	F	G	N	I	L	D	R	H	R	Q	V	G	N	A	V	P	P	P	L	A	K	A	I	G	L	E	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			S	S			T	T	S	S	S						S	S	S	S	S	B										T	T			T	T					S	S											S
	.	.	.	.	.
Sequence	L	C	L	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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