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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2fugA_

Fold library idPDB HeaderMoleculeTitle
c2fugA_PDB header: oxidoreductaseChain: A: PDB Molecule: nadh-quinone oxidoreductase chain 1;PDBTitle: crystal structure of the hydrophilic domain of respiratory2 complex i from thermus thermophilus


Added to library: Tue Mar 16 12:02:37 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGLDPRFERTLYAHVGKEGSWTLDYYLRHGGYETAKRVLKEKTPDEVIEEVKRSGLRGRGGAGFPTGLKW
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Known secondary structure (DSSP)



TT
TT



SS


S

STTTTTS
TTT
B
TTSS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SFMPKDDGKQHYLICNADESEPGSFKDRYILEDVPHLLIEGMILAGYAIRATVGYIYVRGEYRRAADRLE
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Known secondary structure (DSSP) TS
SSS





STT

S
T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAIKEARARGYLGKNLFGTDFSFDLHVHRGAGAYICGEETALMNSLEGLRANPRLKPPFPAQSGLWGKPT
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Known secondary structure (DSSP) TTSSBSSTTSTT

B

S
GGGGSTTS





SSS
TTTSBGGGB
 .........220.........230.........240.........250.........260.........270.........280
Sequence TINNVETLASVVPIMERGADWFAQMGTEQSKGMKLYQISGPVKRPGVYELPMGTTFRELIYEWAGGPLEP
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Known secondary structure (DSSP) S
SSB
SS
BSSSBSS
TT
BTTTT

BSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IQAIIPGGSSTPPLPFTEEVLDTPMSYEHLQAKGSMLGTGGVILIPERVSMVDAMWNLTRFYAHESCGKC
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Known secondary structure (DSSP)
S
TTS



T
B
STTTTTTTSS

STTTTS


S

 .........360.........370.........380.........390.........400.........410.........420
Sequence TPCREGVAGFMVNLFAKIGTGQGEEKDVENLEALLPLIEGRSFCPLADAAVWPVKGSLRHFKDQYLALAR
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Known secondary structure (DSSP) TTTTTTBT


S

SST
 .........430..
Sequence EKRPVPRPSLWR
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Known secondary structure (DSSP) TT
B








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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