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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1nekB_

Fold library idPDB HeaderMoleculeTitle
c1nekB_PDB header: oxidoreductase/electron transportChain: B: PDB Molecule: succinate dehydrogenase iron-sulfur protein;PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound


Added to library: Tue Mar 16 13:23:25 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGK
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TTT
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S
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 .........80.........90.........100.........110.........120.........130.........140
Sequence NGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQR
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Known secondary structure (DSSP) TTS
BTTTT

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T

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S

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 .........150.........160.........170.........180.........190.........200.........210
Sequence EKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIM
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Known secondary structure (DSSP) TTTTTS





T

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T
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TT
SSSTTTT




 .........220.........230........
Sequence NCVSVCPKGLNPTRAIGHIKSMLLQRNA
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Known secondary structure (DSSP)
TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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