Fold library entry viewer: c1dgjA_

Added to library: Tue Mar 16 12:27:11 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	T	K	T	L	I	V	N	G	M	A	R	R	L	L	V	S	P	N	D	L	L	V	D	V	L	R	S	Q	L	Q	L	T	S	V	K	V	G	C	G	K	G	Q	C	G	A	C	T	V	I	L	D	G	K	V	V	R	A	C	I	I	K	M	S	R	V	A	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	B								T	T		B								T	T			T	T	S			S	S	S	S	S	S	S		T	T					T	T					G	G	G		B	G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	V	T	T	L	E	G	I	G	A	P	D	C	L	H	P	L	Q	H	A	W	I	Q	H	G	A	A	Q	C	G	F	C	T	P	G	F	I	V	S	A	K	A	L	L	D	E	N	V	A	P	S	R	E	D	V	R	D	W	F	Q	K	H	H	N	I	C	R	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	T		B	T	T	B												T			S	S		T	T																S	S													T	T				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	Y	K	P	L	V	D	A	V	M	D	A	A	A	I	L	R	G	E	K	T	V	E	E	I	S	F	K	M	P	A	D	G	R	I	W	G	S	S	I	P	R	P	S	A	V	A	K	V	T	G	L	A	E	F	G	A	D	A	A	L	R	M	P	E	N	T	L	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S															T	T	S	S						S					T	T				T	T	S					T	T							T				B					G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	L	A	Q	A	K	V	S	H	A	L	I	K	G	I	D	T	S	E	A	E	K	M	P	G	V	Y	K	V	L	T	H	K	D	V	K	G	K	N	R	I	T	G	L	I	T	F	P	T	N	K	G	D	G	W	E	R	P	I	L	N	D	S	K	I	F	Q	Y	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S														S	T	T							G	G	G			S		S					S	S			T	T		S	S		S					S	S		S	S				S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	L	A	I	V	C	A	D	S	E	A	N	A	R	A	A	A	E	K	V	K	F	D	L	E	L	L	P	E	Y	M	S	A	P	E	A	M	A	P	D	A	I	E	I	H	P	G	T	P	N	V	Y	Y	D	Q	L	E	E	K	G	E	D	T	V	P	F	F	N	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S									T	T													S						S	T	T				S	B	T	T	B		S										S	S		S					S		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	N	V	V	A	E	G	S	Y	Y	T	Q	R	Q	P	H	L	P	I	E	P	D	V	G	Y	G	Y	I	N	E	Q	G	Q	V	V	I	H	S	K	S	V	A	I	H	L	H	A	L	M	I	A	P	G	L	G	L	E	F	P	K	D	L	V	L	V	Q	N	T	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																	S	S										T	T	S									S														T			T	T	T	T							B		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	F	G	Y	K	F	S	P	T	M	E	A	L	V	G	V	A	V	M	A	T	G	R	P	C	H	L	R	Y	N	Y	E	Q	Q	Q	N	Y	T	G	K	R	S	P	F	W	T	T	M	R	Y	A	A	D	R	Q	G	K	I	L	A	M	E	T	D	W	S	V	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	G	G	G	S		S	S													S														S	S		B														T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	P	Y	S	E	F	G	D	L	L	T	L	R	G	A	Q	Y	I	G	A	G	Y	G	I	A	N	I	R	G	T	G	R	T	V	A	T	N	H	C	W	G	A	A	F	R	G	Y	G	A	P	E	S	E	F	P	S	E	V	L	M	D	E	L	A	E	K	L	G	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T												T	T	T	T	B			S												S	S			B				T	T	T	T																				T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	F	E	L	R	A	L	N	C	Y	R	E	G	D	T	T	S	S	G	Q	I	P	E	V	M	S	L	P	E	M	F	D	K	M	R	P	Y	Y	E	E	S	K	K	R	V	K	E	R	S	T	A	E	I	K	R	G	V	G	V	A	L	G	V	Y	G	A	G	L	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B			T	T				T	T	S				S																								T	T			S	S															S	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	D	T	S	E	A	W	V	E	L	N	D	D	G	S	V	T	L	G	N	S	W	E	D	H	G	Q	G	A	D	A	G	S	L	G	T	A	H	E	A	L	R	P	L	G	I	T	P	E	N	I	H	L	V	M	N	D	T	S	K	T	P	N	S	G	P	A	G	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T	T	S											S	S	S														T	G	G	G	T			G	G	G						S	B	T	T	T	S						S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	S	Q	V	V	T	G	N	A	I	R	V	A	C	E	M	L	I	E	G	M	R	K	P	G	G	G	F	F	T	P	A	E	M	K	A	E	G	R	P	M	R	Y	D	G	K	W	T	A	P	A	K	D	C	D	A	K	G	Q	G	S	P	F	A	C	Y	M	Y	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T																	T	B		S	S	S	S	B									T	T												S		B				T	T	S		S	B			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	L	T	E	V	A	V	E	V	A	T	G	K	A	T	V	E	K	M	V	C	V	A	D	I	G	K	I	C	N	K	L	V	V	D	G	Q	I	Y	G	G	L	A	Q	G	V	G	L	A	L	S	E	D	Y	E	D	L	K	K	H	S	T	M	G	G	A	G	I	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T														B	S		S																						T					S	T	T	T	T	S	S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Sequence	I	K	M	I	P	D	D	I	E	I	V	Y	V	E	T	P	R	K	D	G	P	F	G	A	S	G	V	G	E	M	P	L	T	A	P	H	A	A	I	I	N	G	I	Y	N	A	C	G	A	R	V	R	H	L	P	A	R	P	E	K	V	L	E	A	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S		S												T	T	S	G	G	G	B				T	T	G	G	G	S	S														S					B	S										T

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PDB structure

FASTA sequence

Hidden Markov model

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