Fold library entry viewer: c1zlgA_

Added to library: Tue Mar 16 13:04:20 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	G	P	G	A	A	A	A	R	R	L	D	E	S	L	S	A	G	S	V	Q	R	A	R	C	A	S	R	C	L	S	L	Q	I	T	R	I	S	A	F	F	Q	H	F	Q	N	N	G	S	L	V	W	C	Q	N	H	K	Q	C	S	K	C	L	E	P	C	K	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S	S	T	T			S						S				T	T	T	S					T	T	S	S	S	S	S				S						T	T							S	S	S	S	T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	L	R	K	H	Q	C	Q	S	F	C	E	P	L	F	P	K	K	S	Y	E	C	L	T	S	C	E	F	L	K	Y	I	L	L	V	K	Q	G	D	C	P	A	P	E	K	A	S	G	F	A	A	A	C	V	E	S	C	E	V	D	N	E	C	S	G	V	K	K	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S		S	S	S	S	S	S	S		S	T	T	T	T	T	T			S						S				S	T	T	S	S									S		T	T						S		S	S	S	S	S	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	S	N	G	C	G	H	T	C	Q	V	P	K	T	L	Y	K	G	V	P	L	K	P	R	K	E	L	R	F	T	E	L	Q	S	G	Q	L	E	V	K	W	S	S	K	F	N	I	S	I	E	P	V	I	Y	V	V	Q	R	R	W	N	Y	G	I	H	P	S	E	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S							S	S	S																			S	S												S	S	S											S	S	S	S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	T	H	W	Q	T	V	A	Q	T	T	D	E	R	V	Q	L	T	D	I	R	P	S	R	W	Y	Q	F	R	V	A	A	V	N	V	H	G	T	R	G	F	T	A	P	S	K	H	F	R	S	S	K	D	P	S	A	P	P	A	P	A	N	L	R	L	A	N	S	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T									S			T	T												S	S			S	S		S									T	T	T	T	S	S	S				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	S	D	G	S	V	T	V	T	I	V	W	D	L	P	E	E	P	D	I	P	V	H	H	Y	K	V	F	W	S	W	M	V	S	S	K	S	L	V	P	T	K	K	K	R	R	K	T	T	D	G	F	Q	N	S	V	I	L	E	K	L	Q	P	D	C	D	Y	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S											S			S	S	S												S	T	T		S	S											S	S	S	S									S			T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Q	A	I	T	Y	W	G	Q	T	R	L	K	S	A	K	V	S	L	H	F	T	S	T	H	A	T	N	N	K	E	Q	L	V	K	T	R	K	G	G	I	Q	T	Q	L	P	F	Q	R	R	R	P	T	R	P	L	E	V	G	A	P	F	Y	Q	D	G	Q	L	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			S	S		S									S	T	T	T	T	S	S			S	S	S			S		S	S		S	S	S		S	S	S																B	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	V	Y	W	K	K	T	E	D	P	T	V	N	R	Y	H	V	R	W	F	P	E	A	C	A	H	N	R	T	T	G	S	E	A	S	S	G	M	T	H	E	N	Y	I	I	L	Q	D	L	S	F	S	C	K	Y	K	V	T	V	Q	P	I	R	P	K	S	H	S	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S											T	T		S	S										S	S	T	T												T	T		B										S	S			S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	A	V	F	F	T	T	P	P	C	S	A	L	K	G	K	S	H	K	P	I	G	C	L	G	E	A	G	H	V	L	S	K	V	L	A	K	P	E	N	L	S	A	S	F	I	V	Q	D	V	N	I	T	G	H	F	S	W	K	M	A	K	A	N	L	Y	Q	P	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									B		S					T	T	S	S	S	S	T	T	S	S		S	S	S	S	S	S	S	S	S													S	S	S											T	T		S		G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	F	Q	V	T	W	A	E	V	T	T	E	S	R	Q	N	S	L	P	N	S	I	I	S	Q	S	Q	I	L	P	S	D	H	Y	V	L	T	V	P	N	L	R	P	S	T	L	Y	R	L	E	V	Q	V	L	T	P	G	G	E	G	P	A	T	I	K	T	F	R	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S															S	S		S	S								S			T	T												S	S			S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
Sequence	E	L	P	P	S	S	A	H	R	S	H	L	K	H	R	H	P	H	H	Y	K	P	S	P	E	R	Y	G	K	P	I	P	N	P	L	L	G	L	D	S	T	R	T	G	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S			S	S			S	S								S	S	S	S	S		S					S	S					S			S	S	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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