Emaill.a.kelley@imperial.ac.uk
DescriptionP0C018
DateThu Jan 5 11:29:38 GMT 2012
Unique Job ID55ccfb56e06e7b5e

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1d2gycm1



100.0 100 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
2c3bboQ_



100.0 46 PDB header:ribosome
Chain: Q: PDB Molecule:ribosomal protein l18;
PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome
3d1ovya_



100.0 57 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
4c2jl8S_



100.0 45 PDB header:ribosome
Chain: S: PDB Molecule:50s ribosomal protein l18;
PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome (part 4 of 4).3 this file contains the 50s subunit.
5d2zjrl1



100.0 50 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
6d2j01s1



100.0 47 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
7d1vqon1



100.0 28 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
8c2zkrn_



99.8 23 PDB header:ribosomal protein/rna
Chain: N: PDB Molecule:rna expansion segment es27;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
9c4a1aM_



99.8 27 PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l5;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.
10c3izcQ_



99.8 29 PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein rpl5 (l18p);
PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
11c3iz5Q_



99.7 27 PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l5 (l18p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
12c1s1iE_



99.6 28 PDB header:ribosome
Chain: E: PDB Molecule:60s ribosomal protein l5;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
13d2uubk1



97.4 21 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
14d2qalk1



97.1 20 Fold:Ribonuclease H-like motif
Superfamily:Translational machinery components
Family:Ribosomal protein L18 and S11
15c3bbnK_



96.8 18 PDB header:ribosome
Chain: K: PDB Molecule:ribosomal protein s11;
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.
16c2zkqk_



96.5 16 PDB header:ribosomal protein/rna
Chain: K: PDB Molecule:
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
17c3jyvK_



95.1 20 PDB header:ribosome
Chain: K: PDB Molecule:40s ribosomal protein s14(a);
PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution
18c2yfnA_



70.6 31 PDB header:hydrolase
Chain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask;
PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask
19c3mi6A_



63.9 23 PDB header:hydrolase
Chain: A: PDB Molecule:alpha-galactosidase;
PDBTitle: crystal structure of the alpha-galactosidase from lactobacillus2 brevis, northeast structural genomics consortium target lbr11.
20c2xn1B_



61.1 26 PDB header:hydrolase
Chain: B: PDB Molecule:alpha-galactosidase;
PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris
21c3gzaB_



not modelled 59.5 28 PDB header:hydrolase
Chain: B: PDB Molecule:putative alpha-l-fucosidase;
PDBTitle: crystal structure of putative alpha-l-fucosidase (np_812709.1) from2 bacteroides thetaiotaomicron vpi-5482 at 1.60 a resolution
22c2pohA_



not modelled 50.6 50 PDB header:viral protein
Chain: A: PDB Molecule:head completion protein;
PDBTitle: structure of phage p22 tail needle gp26
23c3tevA_



not modelled 45.1 19 PDB header:hydrolase
Chain: A: PDB Molecule:glycosyl hyrolase, family 3;
PDBTitle: the crystal structure of glycosyl hydrolase from deinococcus2 radiodurans r1
24d1hl9a2



not modelled 44.1 38 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Putative alpha-L-fucosidase, catalytic domain
25c1hl8B_



not modelled 43.0 38 PDB header:hydrolase
Chain: B: PDB Molecule:putative alpha-l-fucosidase;
PDBTitle: crystal structure of thermotoga maritima alpha-fucosidase
26c2wvsD_



not modelled 41.1 29 PDB header:hydrolase
Chain: D: PDB Molecule:alpha-l-fucosidase;
PDBTitle: crystal structure of an alpha-l-fucosidase gh29 trapped2 covalent intermediate from bacteroides thetaiotaomicron in3 complex with 2-fluoro-fucosyl fluoride using an e288q4 mutant
27c3ff4A_



not modelled 40.0 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein chu_1412
28d1gtka2



not modelled 37.1 18 Fold:dsRBD-like
Superfamily:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Family:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
29c3mo4B_



not modelled 35.6 40 PDB header:hydrolase
Chain: B: PDB Molecule:alpha-1,3/4-fucosidase;
PDBTitle: the crystal structure of an alpha-(1-3,4)-fucosidase from2 bifidobacterium longum subsp. infantis atcc 15697
30c3m0zD_



not modelled 31.6 15 PDB header:lyase
Chain: D: PDB Molecule:putative aldolase;
PDBTitle: crystal structure of putative aldolase from klebsiella2 pneumoniae.
31d1owla2



not modelled 29.8 18 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
32d1np7a2



not modelled 28.6 14 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
33c3eypB_



not modelled 28.0 40 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative alpha-l-fucosidase;
PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron
34c3noyA_



not modelled 27.5 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: crystal structure of ispg (gcpe)
35d3cuma2



not modelled 25.0 22 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
36d1t35a_



not modelled 24.8 36 Fold:MCP/YpsA-like
Superfamily:MCP/YpsA-like
Family:MoCo carrier protein-like
37c3qk7C_



not modelled 23.4 28 PDB header:transcription regulator
Chain: C: PDB Molecule:transcriptional regulators;
PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001
38c2juiA_



not modelled 23.0 32 PDB header:toxin
Chain: A: PDB Molecule:plne;
PDBTitle: three-dimensional structure of the two peptides that2 constitute the two-peptide bacteriocin plantaracin ef
39d1zpda2



not modelled 21.3 22 Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
40c3qhaB_



not modelled 20.7 25 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of a putative oxidoreductase from mycobacterium2 avium 104
41d1u3da2



not modelled 19.9 12 Fold:Cryptochrome/photolyase, N-terminal domain
Superfamily:Cryptochrome/photolyase, N-terminal domain
Family:Cryptochrome/photolyase, N-terminal domain
42c2cukC_



not modelled 18.1 32 PDB header:oxidoreductase
Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase;
PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8
43c2uyyD_



not modelled 18.1 16 PDB header:cytokine
Chain: D: PDB Molecule:n-pac protein;
PDBTitle: structure of the cytokine-like nuclear factor n-pac
44d1kjqa2



not modelled 17.4 29 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
45c2iz1C_



not modelled 16.9 15 PDB header:oxidoreductase
Chain: C: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating;
PDBTitle: 6pdh complexed with pex inhibitor synchrotron data
46d1pdaa2



not modelled 16.7 29 Fold:dsRBD-like
Superfamily:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Family:Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
47d2djia2



not modelled 15.6 28 Fold:Thiamin diphosphate-binding fold (THDP-binding)
Superfamily:Thiamin diphosphate-binding fold (THDP-binding)
Family:Pyruvate oxidase and decarboxylase Pyr module
48c1vpdA_



not modelled 15.5 28 PDB header:oxidoreductase
Chain: A: PDB Molecule:tartronate semialdehyde reductase;
PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
49c2duwA_



not modelled 15.5 36 PDB header:ligand binding protein
Chain: A: PDB Molecule:putative coa-binding protein;
PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
50c3gybB_



not modelled 15.5 11 PDB header:transcription regulator
Chain: B: PDB Molecule:transcriptional regulators (laci-family
PDBTitle: crystal structure of a laci-family transcriptional2 regulatory protein from corynebacterium glutamicum
51d1vpda2



not modelled 15.2 29 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
52d1y81a1



not modelled 15.0 28 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
53c3eywA_



not modelled 15.0 25 PDB header:transport protein
Chain: A: PDB Molecule:c-terminal domain of glutathione-regulated potassium-efflux
PDBTitle: crystal structure of the c-terminal domain of e. coli kefc in complex2 with keff
54d1dosa_



not modelled 14.1 10 Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class II FBP aldolase
55c3qi7A_



not modelled 14.1 29 PDB header:transcription
Chain: A: PDB Molecule:putative transcriptional regulator;
PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution
56d1np3a2



not modelled 14.0 27 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
57c2w4lC_



not modelled 13.7 24 PDB header:hydrolase
Chain: C: PDB Molecule:deoxycytidylate deaminase;
PDBTitle: human dcmp deaminase
58c2ypnA_



not modelled 13.3 18 PDB header:transferase
Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase);
PDBTitle: hydroxymethylbilane synthase
59d1ktba2



not modelled 13.2 24 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:Amylase, catalytic domain
60d1hg3a_



not modelled 13.2 23 Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
61c3toxG_



not modelled 12.3 28 PDB header:oxidoreductase
Chain: G: PDB Molecule:short chain dehydrogenase;
PDBTitle: crystal structure of a short chain dehydrogenase in complex with2 nad(p) from sinorhizobium meliloti 1021
62c2gf2B_



not modelled 12.2 20 PDB header:oxidoreductase
Chain: B: PDB Molecule:3-hydroxyisobutyrate dehydrogenase;
PDBTitle: crystal structure of human hydroxyisobutyrate dehydrogenase
63d1qyda_



not modelled 12.1 11 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
64d1w0ma_



not modelled 12.1 21 Fold:TIM beta/alpha-barrel
Superfamily:Triosephosphate isomerase (TIM)
Family:Triosephosphate isomerase (TIM)
65c3muxB_



not modelled 12.0 23 PDB header:lyase
Chain: B: PDB Molecule:putative 4-hydroxy-2-oxoglutarate aldolase;
PDBTitle: the crystal structure of a putative 4-hydroxy-2-oxoglutarate aldolase2 from bacillus anthracis to 1.45a
66c3m6yA_



not modelled 11.6 23 PDB header:lyase
Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase;
PDBTitle: structure of 4-hydroxy-2-oxoglutarate aldolase from bacillus cereus at2 1.45 a resolution.
67d1aopa1



not modelled 11.4 25 Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
68c2yicC_



not modelled 11.2 22 PDB header:lyase
Chain: C: PDB Molecule:2-oxoglutarate decarboxylase;
PDBTitle: crystal structure of the suca domain of mycobacterium smegmatis2 alpha-ketoglutarate decarboxylase (triclinic form)
69d1pjca1



not modelled 11.2 32 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
70c1ozhD_



not modelled 11.1 16 PDB header:lyase
Chain: D: PDB Molecule:acetolactate synthase, catabolic;
PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
71c3l6dB_



not modelled 10.8 30 PDB header:oxidoreductase
Chain: B: PDB Molecule:putative oxidoreductase;
PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440
72d1ae1a_



not modelled 10.5 23 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Tyrosine-dependent oxidoreductases
73c3u5in_



not modelled 10.5 44 PDB header:ribosome
Chain: N: PDB Molecule:60s ribosomal protein l15-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution
74c3u5en_



not modelled 10.5 44 PDB header:ribosome
Chain: N: PDB Molecule:60s ribosomal protein l15-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 resolution
75c1tezB_



not modelled 10.5 19 PDB header:lyase/dna
Chain: B: PDB Molecule:deoxyribodipyrimidine photolyase;
PDBTitle: complex between dna and the dna photolyase from anacystis nidulans
76c1zy9A_



not modelled 10.5 15 PDB header:hydrolase
Chain: A: PDB Molecule:alpha-galactosidase;
PDBTitle: crystal structure of alpha-galactosidase (ec 3.2.1.22) (melibiase)2 (tm1192) from thermotoga maritima at 2.34 a resolution
77d1hjqa_



not modelled 10.5 26 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
78d1vq2a_



not modelled 10.4 26 Fold:Cytidine deaminase-like
Superfamily:Cytidine deaminase-like
Family:Deoxycytidylate deaminase-like
79d1pgja2



not modelled 10.3 25 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
80d2i9ua1



not modelled 10.2 14 Fold:Composite domain of metallo-dependent hydrolases
Superfamily:Composite domain of metallo-dependent hydrolases
Family:SAH/MTA deaminase-like
81d2naca1



not modelled 9.9 25 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
82d1p5dx1



not modelled 9.8 24 Fold:Phosphoglucomutase, first 3 domains
Superfamily:Phosphoglucomutase, first 3 domains
Family:Phosphoglucomutase, first 3 domains
83c3bmxB_



not modelled 9.8 13 PDB header:hydrolase
Chain: B: PDB Molecule:uncharacterized lipoprotein ybbd;
PDBTitle: beta-n-hexosaminidase (ybbd) from bacillus subtilis
84c3lk6A_



not modelled 9.7 12 PDB header:hydrolase
Chain: A: PDB Molecule:lipoprotein ybbd;
PDBTitle: beta-n-hexosaminidase n318d mutant (ybbd_n318d) from bacillus subtilis
85d2d59a1



not modelled 9.6 36 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
86c3egcF_



not modelled 9.6 15 PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:putative ribose operon repressor;
PDBTitle: crystal structure of a putative ribose operon repressor from2 burkholderia thailandensis
87c2rafC_



not modelled 9.5 12 PDB header:oxidoreductase
Chain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase;
PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution
88d1gdha1



not modelled 9.5 29 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
89c3sjuA_



not modelled 9.5 35 PDB header:oxidoreductase
Chain: A: PDB Molecule:keto reductase;
PDBTitle: hedamycin polyketide ketoreductase bound to nadph
90d1vp8a_



not modelled 9.4 41 Fold:Pyruvate kinase C-terminal domain-like
Superfamily:PK C-terminal domain-like
Family:MTH1675-like
91d1zj8a1



not modelled 9.3 22 Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
92d1ebda2



not modelled 9.2 13 Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD/NAD-linked reductases, N-terminal and central domains
93d1leha1



not modelled 9.2 24 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Aminoacid dehydrogenase-like, C-terminal domain
94d3coxa1



not modelled 9.1 22 Fold:FAD/NAD(P)-binding domain
Superfamily:FAD/NAD(P)-binding domain
Family:FAD-linked reductases, N-terminal domain
95c2fpgA_



not modelled 8.9 13 PDB header:ligase
Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain,
PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp
96c3q94B_



not modelled 8.9 16 PDB header:lyase
Chain: B: PDB Molecule:fructose-bisphosphate aldolase, class ii;
PDBTitle: the crystal structure of fructose 1,6-bisphosphate aldolase from2 bacillus anthracis str. 'ames ancestor'
97c1zpdA_



not modelled 8.8 26 PDB header:alcohol fermentation
Chain: A: PDB Molecule:pyruvate decarboxylase;
PDBTitle: pyruvate decarboxylase from zymomonas mobilis
98c3uf0A_



not modelled 8.8 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:short-chain dehydrogenase/reductase sdr;
PDBTitle: crystal structure of a putative nad(p) dependent gluconate 5-2 dehydrogenase from beutenbergia cavernae(efi target efi-502044) with3 bound nadp (low occupancy)
99c3jvdA_



not modelled 8.6 15 PDB header:transcription regulator
Chain: A: PDB Molecule:transcriptional regulators;
PDBTitle: crystal structure of putative transcription regulation repressor (laci2 family) from corynebacterium glutamicum