PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3jvdA_

Fold library id	PDB Header	Molecule	Title
c3jvdA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulators;	PDBTitle: crystal structure of putative transcription regulation2 repressor (laci family) from corynebacterium glutamicum

Links to external resources
Added to library: Sat Aug 28 23:55:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S A L V G V I V P D L S N E Y Y S E S L Q T I Q Q D L K A A G Y Q M L V A E A N S V Q A Q D V V M E S L I S I Q A A G I I H V P V V G S I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S T
S T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E G I P M V Q L T R P G F P R V L C D D E A G F F Q L T E S V L G G S G M N I A A L V G E E S L S T T Q E R M R G I S H A A S I Y G A E V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S S S
S
T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F H F G H Y S V E S G E E M A Q V V F N N G L P D A L I V A S P R L M A G V M R A F T R L N V R V P H D V V I G G Y D D P E W Y S F V G A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
S
T T
T T T T
S
G G G G G S T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . .

Sequence I T T F V P P H E E M G K E A V R L L V D L I E N P E T G D V V L Q G Q V I L R G S S T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	L	V	G	V	I	V	P	D	L	S	N	E	Y	Y	S	E	S	L	Q	T	I	Q	Q	D	L	K	A	A	G	Y	Q	M	L	V	A	E	A	N	S	V	Q	A	Q	D	V	V	M	E	S	L	I	S	I	Q	A	A	G	I	I	H	V	P	V	V	G	S	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	S	S																		T										S															T		S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	G	I	P	M	V	Q	L	T	R	P	G	F	P	R	V	L	C	D	D	E	A	G	F	F	Q	L	T	E	S	V	L	G	G	S	G	M	N	I	A	A	L	V	G	E	E	S	L	S	T	T	Q	E	R	M	R	G	I	S	H	A	A	S	I	Y	G	A	E	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										S																					S	S	S								S		T	T	S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	H	F	G	H	Y	S	V	E	S	G	E	E	M	A	Q	V	V	F	N	N	G	L	P	D	A	L	I	V	A	S	P	R	L	M	A	G	V	M	R	A	F	T	R	L	N	V	R	V	P	H	D	V	V	I	G	G	Y	D	D	P	E	W	Y	S	F	V	G	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S														T				S																				T	T			T	T	T	T							S			G	G	G	G	G	S	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Sequence	I	T	T	F	V	P	P	H	E	E	M	G	K	E	A	V	R	L	L	V	D	L	I	E	N	P	E	T	G	D	V	V	L	Q	G	Q	V	I	L	R	G	S	S	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S																G	G	G