Fold library entry viewer: c2yicC_

Added to library: Sat Jun 18 22:34:15 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	R	V	I	E	L	I	A	A	Y	R	N	R	G	H	L	M	A	D	I	D	P	L	R	L	D	N	T	R	F	T	L	W	D	L	D	R	E	F	K	K	L	R	D	I	L	S	V	L	R	D	A	Y	C	R	H	V	G	V	E	Y	T	H	I	L	E	P	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G	S	S				T	T				G	G	G			T	T	G	G	G	S	B			B													S	S	S						T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	R	W	I	Q	E	R	V	E	T	K	H	D	K	P	T	V	A	E	Q	K	Y	I	L	S	K	L	N	A	A	E	A	F	E	T	F	L	Q	T	K	Y	V	G	Q	K	R	F	S	L	E	G	A	E	T	V	I	P	M	M	D	A	V	I	D	Q	C	A	E	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S																																S	S		G	G	G			T	T		T	T															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	E	V	V	I	A	M	P	H	R	G	R	L	N	V	L	A	N	I	V	G	K	P	Y	S	Q	I	F	S	E	G	D	V	K	Y	H	L	G	A	T	G	T	Y	I	Q	M	F	G	D	N	D	I	E	V	S	L	T	A	N	P	S	H	L	E	A	V	D	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S								S	T	T								T	T								T					G	G	G	T										S	S	S	S												S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	E	G	L	V	R	A	K	Q	D	L	L	D	T	G	E	E	G	R	F	S	V	V	P	L	M	L	H	G	D	A	A	F	A	G	Q	G	V	V	A	E	T	L	N	L	A	L	L	R	G	Y	R	T	G	G	T	I	H	I	V	V	N	N	Q	I	G	F	T	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S	T	T																											T	T	T	T		T	T	T			S										S		B	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	T	D	S	R	S	S	E	Y	C	T	D	V	A	K	M	I	G	A	P	I	F	H	V	N	G	D	D	P	E	A	C	A	W	V	A	R	L	A	V	D	F	R	Q	A	F	K	K	D	V	V	I	D	M	L	C	Y	R	R	R	G	H	N	E	G	D	D	P	S	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S	T	T	G	G	G	G	G	G	T								T	T																																	S		S	S	T	T			G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	Q	P	Y	M	Y	D	V	I	D	T	K	R	G	S	R	K	A	Y	T	E	A	L	I	G	R	G	D	I	S	M	K	E	A	E	D	A	L	R	D	Y	Q	G	Q	L	E	R	V	F	N	E	V	R	E	L	E	K	H	E	L	A	T	A	V	D	K	A	M	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T															T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	I	G	D	A	H	L	A	L	P	E	G	F	T	V	H	P	R	V	R	P	V	L	E	K	R	R	E	M	A	Y	E	G	R	I	D	W	A	F	A	E	L	L	A	L	G	S	L	I	A	E	G	K	L	V	R	L	S	G	Q	D	T	Q	R	G	T	F	T	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				T	T					T	T	T																B																T	T								T	T	T	T	T		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	H	A	V	I	V	D	R	K	T	G	E	E	F	T	P	L	Q	L	L	A	T	N	P	D	G	T	P	T	G	G	K	F	L	V	Y	N	S	A	L	S	E	F	A	A	V	G	F	E	Y	G	Y	S	V	G	N	P	D	A	M	V	L	W	E	A	Q	F	G	D	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				T	T	T						G	G	G	G	G	G	B		T	T	S		B		S										S		S															T	T	S							S	S	G	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	G	A	Q	S	I	I	D	E	F	I	S	S	G	E	A	K	W	G	Q	L	S	D	V	V	L	L	L	P	H	G	H	E	G	Q	G	P	D	H	T	S	G	R	I	E	R	F	L	Q	L	W	A	E	G	S	M	T	I	A	M	P	S	T	P	A	N	Y	F	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G							T	T	T	T																				S	S	S		T	T	S	S													T	T	S								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	R	R	H	G	K	D	G	I	Q	R	P	L	I	V	F	T	P	K	S	M	L	R	N	K	A	A	V	S	D	I	R	D	F	T	E	S	K	F	R	S	V	L	E	E	P	M	Y	T	D	G	E	G	D	R	N	K	V	T	R	L	L	L	T	S	G	K	I	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S											S	G	G	G	G		T	T	S		B							S					S									T	S	S			G	G	G									S	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	L	A	A	R	K	A	K	E	N	R	E	D	V	A	I	V	R	I	E	Q	L	A	P	L	P	R	R	R	L	A	E	T	L	D	R	Y	P	N	V	K	E	K	F	W	V	Q	E	E	P	A	N	Q	G	A	W	P	S	F	G	L	T	L	P	E	I	L	P	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T		T	T											S											T	T		T	T												T	T	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.
Sequence	F	T	G	L	K	R	I	S	R	R	A	M	S	A	P	S	S	G	S	S	K	V	H	A	V	E	Q	Q	E	I	L	D	T	A	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										S	S	S	S		S																	T

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PDB structure

FASTA sequence

Hidden Markov model

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