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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qi7A_

Fold library idPDB HeaderMoleculeTitle
c3qi7A_PDB header: transcriptionChain: A: PDB Molecule: putative transcriptional regulator;PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution


Added to library: Sat Mar 26 08:49:34 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IIDDFKVAVVTQPLSENKVQYNXVEEXAKEYEEENKIDKTKVKQTIKHVVLPENFTSNIDSAINKIVKLA
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Known secondary structure (DSSP)





TTT
TT








TTGGGGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DDKEVQAIVVSTDQAGLLPALQKVKEKRPEIITISAPXGDDKNQLSQFVDVNLGVSAEERGKVLAERSKE
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Known secondary structure (DSSP) G
TT
SS



TTSSS

S
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence XGAKAFIHYASTDDLKDVNIAKRLEXIKETCKNIGLPFVQVNTPNINTEEDKNKVKQFLNEDIEKQVKKY
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Known secondary structure (DSSP) TT
S
TTGGGSTT




SST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKDINVFGVNEYXDEVILTKALELKYIVAEQSNPSPIQTYPSVXGLKISEKDAQNYDKINDXISEKAKAF
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Known secondary structure (DSSP)
S

SS

BB


SS

TTTTT



GGGTT
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GXSNRLGGYPXPXDAFLPSLAIYLATEXVKQDLTQEDVCDPDYLEAFTELRFGIGSEFTPLTEVLYNYQS
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Known secondary structure (DSSP) T
TTSB
SS
T


S


SSSS
TT
 ........
Sequence VILSQLIY
Predicted secondary structure

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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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