Fold library entry viewer: c3mi6A_

Added to library: Sat Aug 28 15:47:51 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	H	V	N	E	A	N	L	T	F	H	L	Q	T	D	H	T	S	Y	I	F	Q	I	X	K	N	G	E	A	G	Q	I	Y	Y	G	P	R	I	H	V	Q	P	T	Y	Q	N	L	X	S	Q	E	W	R	D	A	T	P	S	L	N	E	E	N	P	N	F	Q	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T							S	S									T	T	S	S														S			T	G	G	G						S	S	S			S		T	T		T	T			G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	K	A	E	Y	A	S	L	G	K	G	D	F	R	Q	P	A	F	Q	V	T	Q	A	N	G	S	R	I	T	E	L	T	Y	D	H	Y	Q	L	L	T	G	K	Q	R	L	A	N	L	P	S	T	F	D	D	T	D	D	D	A	Q	T	L	V	V	S	F	N	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S		B	S	S			S	S	S	S			S			S						T	T	S																S					S	S	S							S														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	T	G	L	A	L	D	L	N	Y	S	I	F	P	H	Q	D	V	I	V	K	S	A	K	F	T	N	P	S	S	E	K	L	V	L	N	R	A	L	S	S	Q	L	D	L	P	D	A	N	Y	D	L	I	Q	F	S	G	T	W	A	R	E	R	H	L	Y	R	H	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T												G	G	G	T												S	S	S															S													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	P	G	X	Q	S	I	S	S	L	R	X	A	S	S	H	Q	Q	N	P	F	X	X	L	A	R	P	Q	T	T	D	E	Q	G	A	V	F	G	F	N	L	V	Y	S	G	N	F	L	D	A	I	E	V	D	Q	Y	S	T	S	R	I	L	T	G	I	N	P	D	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S									S	S	S	S		S	S	B		S							T	T			S	S	S	B								S			S	S									T	T	S										S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	W	N	L	A	P	Q	A	T	F	Q	T	P	E	A	I	L	S	Y	T	S	A	G	X	N	Q	L	S	Q	Q	X	A	S	F	Y	Q	Q	H	L	V	N	P	R	F	A	H	E	E	R	P	V	L	I	N	N	W	E	A	T	Y	F	D	F	N	E	A	K	L	X	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T														S	B																	T	S		T	T	T	T	T	S													T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	V	N	Q	A	K	R	L	G	I	E	X	F	V	L	D	D	G	W	F	G	H	R	D	D	D	T	T	S	L	G	D	W	F	V	D	Q	R	K	F	P	D	G	I	E	H	F	S	Q	A	V	H	Q	Q	G	X	K	F	G	L	W	F	E	P	E	X	V	S	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T								T	T		B	T	T		S	S	T	T	S		T	T			S	B		T	T	T		T	T												T	T									T	T				S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	L	Y	Q	Q	H	P	D	W	L	I	H	A	P	K	S	T	P	T	P	G	R	H	Q	F	V	L	D	X	A	R	P	E	V	V	D	Y	L	F	K	L	X	S	Q	X	I	E	S	A	N	L	D	Y	I	K	W	D	X	N	R	Y	A	T	E	X	F	S	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						G	G	G	B				T	T						S	S	S				B		T	T																				T		S								S				S				S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	T	S	D	Q	Q	L	E	L	P	H	R	Y	I	L	G	V	Y	Q	L	Y	A	R	L	T	Q	A	Y	P	N	V	L	F	E	S	C	A	S	G	G	G	R	F	D	L	G	X	X	Y	Y	A	P	Q	A	W	T	S	D	D	T	D	A	A	E	R	L	L	I	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G	G	G	G																					T	T							S	T	T	T	S	S		S							S	S						S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	T	S	Y	G	Y	P	Q	A	X	X	G	A	H	V	S	A	V	P	N	D	Q	X	G	R	I	T	S	L	K	T	R	G	A	V	A	F	F	G	D	L	G	Y	E	L	D	I	T	K	X	A	P	T	E	L	D	Q	V	K	K	Q	V	A	F	Y	K	C	Y	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S		G	G	G								S	S		T	T	T														T	S	S						S		S	T	T																			T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	F	Q	F	G	K	F	Y	R	I	D	S	P	F	V	E	D	G	N	V	T	S	W	Q	V	V	S	D	D	Q	K	Q	A	I	A	A	R	Y	Q	L	L	N	H	P	N	A	P	Y	T	R	F	Y	F	K	G	L	R	P	N	Q	R	Y	Q	I	N	D	D	P	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						S		T	T	S	T	T											T	T	S	S									S	S			S	S										S			T	T						T	T			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Sequence	Y	Y	G	D	E	L	X	N	A	G	Y	F	V	P	T	I	L	A	D	G	Q	E	S	K	D	F	Y	T	Q	L	F	V	V	T	A	I	L	E	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T											S	S	S			S	S

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PDB structure

FASTA sequence

Hidden Markov model

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