PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3m6yA_

Fold library id	PDB Header	Molecule	Title
c3m6yA_	PDB header: lyase	Chain: A: PDB Molecule: 4-hydroxy-2-oxoglutarate aldolase;	PDBTitle: structure of 4-hydroxy-2-oxoglutarate aldolase from bacillus cereus at2 1.45 a resolution.

Links to external resources
Added to library: Sat Aug 28 21:23:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X T N I Q K R F Y K G R V A L N V L A N N I E N A K D I F E A A E G Y V V V G V L S K D Y P T V E E A V T A X K A Y G K E I D D A V S I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G G S B T T T B
S S T T T
G G G S S S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G A G D N R Q A A V V A E I A K H Y P G S H I N Q V F P S V G A T R A N L G E K D S W I N S L V S P T G K V G Y V N I S T G P I S A A G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T T T
S
B G G G T T
B
S S T T
S T T G G G S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E K A I V P I K T A I A L V R D X G G N S L K Y F P X K G L A H E E E Y R A V A K A C A E E G F A L E P T G G I D K E N F E T I V R I A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
T T T T T T
B S S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .

Sequence A N V E Q V I P H V Y S S I I D K E T G N T K V E A V R E L L A V V K K L V D Q Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
B
G G G B
T T T
B
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	T	N	I	Q	K	R	F	Y	K	G	R	V	A	L	N	V	L	A	N	N	I	E	N	A	K	D	I	F	E	A	A	E	G	Y	V	V	V	G	V	L	S	K	D	Y	P	T	V	E	E	A	V	T	A	X	K	A	Y	G	K	E	I	D	D	A	V	S	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	G	G	G	G	S	B	T	T	T	B							S	S											T	T	T								G	G	G	S	S	S															T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	A	G	D	N	R	Q	A	A	V	V	A	E	I	A	K	H	Y	P	G	S	H	I	N	Q	V	F	P	S	V	G	A	T	R	A	N	L	G	E	K	D	S	W	I	N	S	L	V	S	P	T	G	K	V	G	Y	V	N	I	S	T	G	P	I	S	A	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		G	G	G								T	T	T				S					B	G	G	G									T	T										B			S	S	T	T							S	T	T	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	K	A	I	V	P	I	K	T	A	I	A	L	V	R	D	X	G	G	N	S	L	K	Y	F	P	X	K	G	L	A	H	E	E	E	Y	R	A	V	A	K	A	C	A	E	E	G	F	A	L	E	P	T	G	G	I	D	K	E	N	F	E	T	I	V	R	I	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																	T										T	T	T	T	T															T						B	S	S			T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Sequence	A	N	V	E	Q	V	I	P	H	V	Y	S	S	I	I	D	K	E	T	G	N	T	K	V	E	A	V	R	E	L	L	A	V	V	K	K	L	V	D	Q	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S		B						G	G	G	B		T	T	T			B																	T	T