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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2xn1B_

Fold library idPDB HeaderMoleculeTitle
c2xn1B_PDB header: hydrolaseChain: B: PDB Molecule: alpha-galactosidase;PDBTitle: structure of alpha-galactosidase from lactobacillus acidophilus ncfm2 with tris


Added to library: Sat Aug 13 09:56:05 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLIKFDDQNKVFHLHNKQISYLLSIEDGGTLSHLYFGGAVKNYNNQLKYPRLDRGFSGNLPESLDRTFSR
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Known secondary structure (DSSP)

TTTT
SSGGG

S


STT






TT



TT


TT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSLPKEYSSAGEMDFHTPATIVRNPDGSNALFLAYKSYKIEDGKPDLKGLPHSWTKEDDEAQTLIVTLED
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Known secondary structure (DSSP) TTS
BS

BTTSS

S

S
TTS





S



TTS




SSGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVSKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEKVASMQMDYVDKDFEVITLPGAHANERRVQREN
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Known secondary structure (DSSP) TTTTTTSS
SSS
SS



BTTB



 .........220.........230.........240.........250.........260.........270.........280
Sequence IGQGIKVFSSYRGTSSHQMNPFMALVDHDTNEFMGEAYGFALAYSGNHKFEVERDQFGQIHVNTGINDYN
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Known secondary structure (DSSP)

S

SSSS
SS
TT

SSSB


SS

TTS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKWKLNPNEEFQTPEVLMVYSDQGLNKMSQAFHSLIHERIMRSKFKDQIRPVLVNNWEATYFDFNEDKLK
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Known secondary structure (DSSP)


TT



SB
T


TTTTS




TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence TIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLWFEPEMISY
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Known secondary structure (DSSP) T


TTSBTT
SSTTS
TT

SB
TTT
TT
TT

TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ESNLYKEHPDYLMHVPGRKPCPSRNQYVLELGRKEVRDNIFEQMVKILDSKKIDYIKWDMNRSLSDIYES
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Known secondary structure (DSSP) SS
GGGB


TTS



BTTBB
TTSTTS





S


S


T
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLPADQQGEAYHRYVLGYYDLLNKLVTRYPDILFEGCSGGGGRFDVGQAYYTPQIWASDNTDAIERLKIQ
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Known secondary structure (DSSP) TS
GGGGGG
TTS
BTBBTT
STT
S
BS


 .........570.........580.........590.........600.........610.........620.........630
Sequence YGTSLVYPQSMMTSHVSVSPNEQNGRITPFNTRGAVAMWGDLGYELDLTKMSDEESDQVVKQVTEYKKIR
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Known secondary structure (DSSP) TTTS
GGG
SS
TTT




TTSS
GGG

 .........640.........650.........660.........670.........680.........690.........700
Sequence EVTQFGTLYRLKASASNQCAWMMVDSNKNEAVVTVVNVMAHAQPYCTKTKLAGLDPDKRYKNLETDEVFG
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Known secondary structure (DSSP) S
GGGT
TTS

S

SS






S

TTSTTT

 .........710.........720.........
Sequence GDELMHLGFYDPIERGDFKAKMYHFKAIN
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Known secondary structure (DSSP) T





SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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