![]() |
| ||||||
Protein Homology/analogY Recognition Engine V 2.2 |
|
Fold library id | PDB Header | Molecule | Title |
---|---|---|---|
c1s1iE_ | PDB header: ribosome | Chain: E: PDB Molecule: 60s ribosomal protein l5; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. |
Added to library: Tue Mar 16 12:12:43 2010 | |
  | |
Links to external resources | |
---|---|
![]() | ![]() |
  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | Y | S | S | R | F | Q | T | P | F | R | R | R | R | E | G | K | T | D | Y | Y | Q | R | K | R | L | V | T | Q | H | K | A | K | Y | N | T | P | K | Y | R | L | V | V | R | F | T | N | K | D | I | I | C | Q | I | I | S | S | T | I | T | G | D | V | V | L | A | A | A | Y | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | B | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | S | B |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | H | E | L | P | R | Y | G | I | T | H | G | L | T | N | W | A | A | A | Y | A | T | G | L | L | I | A | R | R | T | L | Q | R | L | G | L | D | E | T | Y | K | G | V | E | E | V | E | G | E | Y | E | L | T | E | A | V | E | D | G | P | R | P | F | K | V | F | L | D | I | G | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | S | S | S | S | S | S | S | S | S | S | S | S | S | S | T | T | T | S | S | T | T | T | T | T | T | T | S | S | S | S | S | S | S | S | S | S | S | S | S | T | T | S | T | T | B | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | Q | R | T | T | T | G | A | R | V | F | G | A | L | K | G | A | S | D | G | G | L | Y | V | P | H | S | E | N | R | F | P | G | W | D | F | E | T | E | E | I | D | P | E | L | L | R | S | Y | I | F | G | G | H | V | S | Q | Y | M | E | E | L | A | D | D | D | E | E | R | F | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | S | T | T | S | S | T | T | G | G | G | S | S | S | S | S | B | T | T | B | T | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | |||||||||||
Sequence | E | L | F | K | G | Y | L | A | D | D | I | D | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S |
Download: | PDB structure | FASTA sequence |
Phyre is now FREE for commercial users! All images and data generated by Phyre2 are free to use in any publication with acknowledgement Accessibility Statement
|