Email l.a.kelley@imperial.ac.uk Description P39288 Date Thu Jan 5 11:58:59 GMT 2012 Unique Job ID 47da916d8c8faa82

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1hfeL_ 98.4 18 PDB header:hydrogenase Chain: L: PDB Molecule:protein (fe-only hydrogenase (e.c.1.18.99.1) PDBTitle: 1.6 a resolution structure of the fe-only hydrogenase from2 desulfovibrio desulfuricans 2 c1gx7A_ 98.2 19 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase 3 d2fug91 98.2 34 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 4 c2fugG_ 98.2 34 PDB header:oxidoreductase Chain: G: PDB Molecule:nadh-quinone oxidoreductase chain 9; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 5 c2ivfB_ 98.1 44 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 6 c2zvsB_ 98.0 32 PDB header:electron transport Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli 7 d1rgva_ 98.0 34 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 8 c2fgoA_ 98.0 32 PDB header:electron transport Chain: A: PDB Molecule:ferredoxin; PDBTitle: structure of the 2[4fe-4s] ferredoxin from pseudomonas2 aeruginosa 9 d7fd1a_ 97.9 30 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 10 c1gthD_ 97.9 35 PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil 11 d1y5ib1 97.9 38 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 12 d2c42a5 97.7 23 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 13 d1blua_ 97.7 34 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 14 c1kqfB_ 97.7 38 PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli 15 d1fcaa_ 97.7 41 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 16 d1clfa_ 97.7 36 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 17 d3c8ya3 97.6 17 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 18 d1jb0c_ 97.6 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 19 d1dura_ 97.6 39 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 20 c2gmhA_ 97.5 19 PDB header:oxidoreductase Chain: A: PDB Molecule:electron transfer flavoprotein-ubiquinone PDBTitle: structure of porcine electron transfer flavoprotein-2 ubiquinone oxidoreductase in complexed with ubiquinone 21 d1kqfb1 not modelled 97.5 41 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 22 d1hfel2 not modelled 97.5 40 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 23 d1bc6a_ not modelled 97.5 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 24 c1ti2F_ not modelled 97.5 23 PDB header:oxidoreductase Chain: F: PDB Molecule:pyrogallol hydroxytransferase small subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici 25 d2gmha3 not modelled 97.4 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:ETF-QO domain-like 26 c2v4jE_ not modelled 97.4 33 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 27 d1h98a_ not modelled 97.4 30 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:7-Fe ferredoxin 28 c3c7bA_ not modelled 97.4 39 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 29 d2fdna_ not modelled 97.4 41 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Short-chain ferredoxins 30 c3c7bE_ not modelled 97.4 37 PDB header:oxidoreductase Chain: E: PDB Molecule:sulfite reductase, dissimilatory-type subunit beta; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 31 d1jnrb_ not modelled 97.4 42 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 32 c2v2kB_ not modelled 97.4 28 PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis 33 c2c3yA_ not modelled 97.4 30 PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus 34 d1xera_ not modelled 97.3 26 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Archaeal ferredoxins 35 c3gyxJ_ not modelled 97.1 44 PDB header:oxidoreductase Chain: J: PDB Molecule:adenylylsulfate reductase; PDBTitle: crystal structure of adenylylsulfate reductase from2 desulfovibrio gigas 36 d1gtea5 not modelled 97.1 34 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 37 c2v4jA_ not modelled 97.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit PDBTitle: the crystal structure of desulfovibrio vulgaris2 dissimilatory sulfite reductase bound to dsrc provides3 novel insights into the mechanism of sulfate respiration 38 c2vpyB_ not modelled 96.9 23 PDB header:oxidoreductase Chain: B: PDB Molecule:nrfc protein; PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp) 39 d3c7bb1 not modelled 96.9 32 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 40 c1c4cA_ not modelled 96.8 11 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum 41 d1te4a_ not modelled 96.7 13 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:PBS lyase HEAT-like repeat 42 d1h0hb_ not modelled 96.6 19 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 43 d2bs2b1 not modelled 96.3 19 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 44 d1kf6b1 not modelled 96.2 19 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 45 c3ltjA_ not modelled 96.2 15 PDB header:protein binding Chain: A: PDB Molecule:alpharep-4; PDBTitle: structure of a new family of artificial alpha helicoidal repeat2 proteins (alpha-rep) based on thermostable heat-like repeats 46 d1vlfn2 not modelled 96.1 14 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 47 c2fugC_ 96.0 25 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 48 d1nekb1 not modelled 96.0 17 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Fumarate reductase/Succinate dehydogenase iron-sulfur protein, C-terminal domain 49 c3l9tA_ not modelled 95.9 14 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein smu.31; PDBTitle: the crystal structure of smu.31 from streptococcus mutans ua159 50 d2fug34 not modelled 95.7 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 51 c1nekB_ not modelled 95.3 20 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:succinate dehydrogenase iron-sulfur protein; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with2 ubiquinone bound 52 c2b76N_ not modelled 95.2 19 PDB header:oxidoreductase Chain: N: PDB Molecule:fumarate reductase iron-sulfur protein; PDBTitle: e. coli quinol fumarate reductase frda e49q mutation 53 c3cf4A_ not modelled 95.1 23 PDB header:oxidoreductase Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; PDBTitle: structure of the codh component of the m. barkeri acds complex 54 c2bs2E_ not modelled 94.9 23 PDB header:oxidoreductase Chain: E: PDB Molecule:quinol-fumarate reductase iron-sulfur subunit b; PDBTitle: quinol:fumarate reductase from wolinella succinogenes 55 d1oyza_ not modelled 94.7 11 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:PBS lyase HEAT-like repeat 56 c2h89B_ not modelled 94.0 23 PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound 57 d1vjwa_ not modelled 92.8 19 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 58 d1ibrb_ not modelled 92.1 19 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Armadillo repeat 59 d1iqza_ not modelled 92.0 22 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 60 d1sj1a_ not modelled 91.9 17 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 61 c3bk7A_ not modelled 90.8 28 PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii 62 d2v4jb1 not modelled 90.2 42 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 63 d1v18a1 not modelled 89.9 24 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Armadillo repeat 64 c3nmwA_ not modelled 88.4 19 PDB header:cell adhesion/cell cycle Chain: A: PDB Molecule:apc variant protein; PDBTitle: crytal structure of armadillo repeats domain of apc 65 c3ifqB_ not modelled 87.0 15 PDB header:cell adhesion Chain: B: PDB Molecule:plakoglobin; PDBTitle: interction of plakoglobin and beta-catenin with desmosomal2 cadherins 66 c1dwlA_ not modelled 86.8 24 PDB header:electron transfer Chain: A: PDB Molecule:ferredoxin i; PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation 67 d1fxra_ not modelled 86.6 17 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Single 4Fe-4S cluster ferredoxin 68 c1m5nS_ not modelled 85.2 19 PDB header:protein transport Chain: S: PDB Molecule:importin beta-1 subunit; PDBTitle: crystal structure of heat repeats (1-11) of importin b2 bound to the non-classical nls(67-94) of pthrp 69 c3c5wA_ not modelled 84.5 11 PDB header:hydrolase Chain: A: PDB Molecule:pp2a a subunit; PDBTitle: complex between pp2a-specific methylesterase pme-1 and pp2a core2 enzyme 70 c3nmzB_ not modelled 84.0 19 PDB header:cell adhesion/cell cycle Chain: B: PDB Molecule:apc variant protein; PDBTitle: crytal structure of apc complexed with asef 71 c3l6yA_ not modelled 83.8 6 PDB header:cell adhesion Chain: A: PDB Molecule:catenin delta-1; PDBTitle: crystal structure of p120 catenin in complex with e-cadherin 72 d1xm9a1 not modelled 83.5 9 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Plakophilin 1 helical region 73 c1lshA_ not modelled 83.0 23 PDB header:lipid binding protein Chain: A: PDB Molecule:lipovitellin (lv-1n, lv-1c); PDBTitle: lipid-protein interactions in lipovitellin 74 c3b2aA_ not modelled 82.8 10 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the archaeal heat-like repeats protein ton_19372 from thermococcus onnurineus na1 75 d1lsha1 not modelled 82.5 25 Fold:alpha-alpha superhelix Superfamily:Lipovitellin-phosvitin complex, superhelical domain Family:Lipovitellin-phosvitin complex, superhelical domain 76 c3somO_ not modelled 81.8 16 PDB header:oxidoreductase Chain: O: PDB Molecule:methylmalonic aciduria and homocystinuria type c protein; PDBTitle: crystal structure of human mmachc 77 d2v4ja1 not modelled 81.4 29 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 78 c2z6hA_ not modelled 79.4 13 PDB header:cell adhesion Chain: A: PDB Molecule:catenin beta-1; PDBTitle: crystal structure of beta-catenin armadillo repeat region2 and its c-terminal domain 79 d3c7ba1 not modelled 79.0 48 Fold:Ferredoxin-like Superfamily:4Fe-4S ferredoxins Family:Ferredoxin domains from multidomain proteins 80 c2vdcI_ not modelled 77.5 22 PDB header:oxidoreductase Chain: I: PDB Molecule:glutamate synthase [nadph] small chain; PDBTitle: the 9.5 a resolution structure of glutamate synthase from2 cryo-electron microscopy and its oligomerization behavior3 in solution: functional implications. 81 c3t7uA_ not modelled 77.2 17 PDB header:cell adhesion Chain: A: PDB Molecule:adenomatous polyposis coli protein; PDBTitle: a new crytal structure of apc-arm 82 c2z6gA_ not modelled 74.9 21 PDB header:cell adhesion Chain: A: PDB Molecule:b-catenin; PDBTitle: crystal structure of a full-length zebrafish beta-catenin 83 d1jdha_ not modelled 73.0 21 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Armadillo repeat 84 d1t06a_ not modelled 72.4 5 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:BC3264-like 85 d1xqra1 not modelled 70.8 16 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:HspBP1 domain 86 c2db0B_ not modelled 68.9 16 PDB header:protein binding Chain: B: PDB Molecule:253aa long hypothetical protein; PDBTitle: crystal structure of ph0542 87 d1gw5b_ not modelled 65.0 16 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Clathrin adaptor core protein 88 d1gtea1 not modelled 59.4 29 Fold:Globin-like Superfamily:alpha-helical ferredoxin Family:Dihydropyrimidine dehydrogenase, N-terminal domain 89 c1xqrA_ not modelled 59.1 17 PDB header:chaperone Chain: A: PDB Molecule:hspbp1 protein; PDBTitle: crystal structure of the hspbp1 core domain 90 c1g8jC_ not modelled 58.6 17 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis 91 c1w63A_ not modelled 57.5 15 PDB header:endocytosis Chain: A: PDB Molecule:adapter-related protein complex 1 gamma 1 PDBTitle: ap1 clathrin adaptor core 92 c3bctA_ not modelled 51.5 13 PDB header:armadillo repeat Chain: A: PDB Molecule:beta-catenin; PDBTitle: the armadillo repeat region from murine beta-catenin 93 d1b3ua_ not modelled 46.1 12 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:HEAT repeat 94 c2hcuA_ not modelled 45.4 50 PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: crystal structure of smu.1381 (or leud) from streptococcus2 mutans 95 c3h5jA_ not modelled 41.3 33 PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: leud_1-168 small subunit of isopropylmalate isomerase (rv2987c) from2 mycobacterium tuberculosis 96 d1yu8x1 not modelled 41.1 19 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 97 c2jkrL_ not modelled 37.6 10 PDB header:endocytosis Chain: L: PDB Molecule:ap-2 complex subunit alpha-2; PDBTitle: ap2 clathrin adaptor core with dileucine peptide rm(2 phosphos)qikrllse 98 c2k6nA_ not modelled 37.6 12 PDB header:structural protein Chain: A: PDB Molecule:supervillin; PDBTitle: solution structure of human supervillin headpiece, minimized2 average 99 d1unda_ not modelled 37.3 19 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 100 d1unca_ not modelled 36.4 19 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 101 d2i9ca1 not modelled 36.4 12 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:RPA1889-like 102 c3q3wB_ not modelled 35.9 33 PDB header:transferase Chain: B: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: isopropylmalate isomerase small subunit from campylobacter jejuni. 103 c2l1lB_ not modelled 35.0 12 PDB header:nuclear protein Chain: B: PDB Molecule:exportin-1; PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp 104 d1yu5x1 not modelled 34.3 19 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 105 d1ee4a_ not modelled 33.5 13 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Armadillo repeat 106 c2fugA_ not modelled 31.8 40 PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 107 d1ujsa_ not modelled 30.3 27 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 108 c1ovxB_ not modelled 30.3 40 PDB header:metal binding protein Chain: B: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: nmr structure of the e. coli clpx chaperone zinc binding domain dimer 109 c2l3xA_ not modelled 29.8 31 PDB header:protein binding Chain: A: PDB Molecule:ablim2 protein; PDBTitle: villin head piece domain of human ablim2 110 d2ds5a1 not modelled 29.5 40 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:ClpX chaperone zinc binding domain 111 c2qk1A_ not modelled 28.8 8 PDB header:protein binding Chain: A: PDB Molecule:protein stu2; PDBTitle: structural basis of microtubule plus end tracking by2 xmap215, clip-170 and eb1 112 d1qzpa_ not modelled 28.3 31 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 113 d1ny8a_ not modelled 28.1 12 Fold:Alpha-lytic protease prodomain-like Superfamily:BolA-like Family:BolA-like 114 d1sfla_ not modelled 24.5 18 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 115 c2w3cA_ not modelled 22.5 0 PDB header:transport protein Chain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115 116 c2yswB_ not modelled 22.5 26 PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 117 d2q22a1 not modelled 22.4 12 Fold:Ava3019-like Superfamily:Ava3019-like Family:Ava3019-like 118 d1x3zb1 not modelled 22.1 32 Fold:XPC-binding domain Superfamily:XPC-binding domain Family:XPC-binding domain 119 d1lrva_ not modelled 20.7 16 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Leucine-rich repeat variant 120 c2c1tA_ not modelled 20.6 13 PDB header:protein transport/membrane protein Chain: A: PDB Molecule:importin alpha subunit; PDBTitle: structure of the kap60p:nup2 complex