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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ltjA_

Fold library idPDB HeaderMoleculeTitle
c3ltjA_PDB header: protein bindingChain: A: PDB Molecule: alpharep-4;PDBTitle: structure of a new family of artificial alpha helicoidal repeat2 proteins (alpha-rep) based on thermostable heat-like repeats


Added to library: Tue Oct 19 11:32:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDER
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Known secondary structure (DSSP)





TT
S


GGGTT
SS

GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKA
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Known secondary structure (DSSP) GTT
SS

GGGTT
SST
GGG
 .........150.........160.........170.........180.........190.
Sequence LKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLETHK
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Known secondary structure (DSSP) TT
SS
S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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