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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2w3cA_

Fold library idPDB HeaderMoleculeTitle
c2w3cA_PDB header: transport proteinChain: A: PDB Molecule: general vesicular transport factor p115;PDBTitle: globular head region of the human general vesicular2 transport factor p115


Added to library: Tue Mar 16 12:59:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPG
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Known secondary structure (DSSP)

TTTTTT
TT


STTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence VKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFER
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Known secondary structure (DSSP) SSTTGGGG
SSTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLDIISEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGWSAQKVTNLHLMLQLV
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Known secondary structure (DSSP) TTGGGS
TT
TT
GGGGSGGG




 .........220.........230.........240.........250.........260.........270.........280
Sequence RVLVSPTNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAP
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Known secondary structure (DSSP) T
TTS
TT
SS

TT
T

 .........290.........300.........310.........320.........330.........340.........350
Sequence SPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATGNSVSAGQLLCGG
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Known secondary structure (DSSP)


T
TTS
TT
TTS




SSS



 .........360.........370.........380.........390.........400.........410.........420
Sequence LFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQQCTNILSQGSKIQTRVGLLMLL
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Known secondary structure (DSSP) TSS
TT
TT


SSSS

TTTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence CTWLSNCPIAVTHFLHNSANVPFLTGQIAENLGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLI
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Known secondary structure (DSSP) TT
TSTTS

TTTTT

S

SSS
 .........500.........510.........520.........530.........540.........550.
Sequence EKRIGKENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY
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Known secondary structure (DSSP) T
TTTTSTTTT
SS


SSGGGTT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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