PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2vpyB_

Fold library id	PDB Header	Molecule	Title
c2vpyB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: nrfc protein;	PDBTitle: polysulfide reductase with bound quinone inhibitor,2 pentachlorophenol (pcp)

Links to external resources
Added to library: Tue Mar 16 11:54:35 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M P R Y A M A I D L S L C V G C A A C A V A C K M E N E V P P G V F N L W I R E R E V G E Y P N L V V E F R P E Q C L H C E N P P C V P V C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T
T T
S
T T S
S S
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P T G A S Y Q T K D G L V L V D P K K C I A C G A C I A A C P Y D A R Y L H P A G Y V S K C T F C A H R L E K G K V P A C V E T C P T Y C R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T S
T T T
T T
T T S S
T T T T
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . .

Sequence T F G D L E D P E S P V A K A L K A A E R V D V L R P E Q G T R P K L F Y L N A P S K K G L T R E S E V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S
S S T T S S
S S
S S T T
S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	P	R	Y	A	M	A	I	D	L	S	L	C	V	G	C	A	A	C	A	V	A	C	K	M	E	N	E	V	P	P	G	V	F	N	L	W	I	R	E	R	E	V	G	E	Y	P	N	L	V	V	E	F	R	P	E	Q	C	L	H	C	E	N	P	P	C	V	P	V	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T															T				T	T			S											T	T	S														S	S		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	T	G	A	S	Y	Q	T	K	D	G	L	V	L	V	D	P	K	K	C	I	A	C	G	A	C	I	A	A	C	P	Y	D	A	R	Y	L	H	P	A	G	Y	V	S	K	C	T	F	C	A	H	R	L	E	K	G	K	V	P	A	C	V	E	T	C	P	T	Y	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S						T	T	S						T	T	T												T	T							T	T	S	S						T	T						T	T								S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Sequence	T	F	G	D	L	E	D	P	E	S	P	V	A	K	A	L	K	A	A	E	R	V	D	V	L	R	P	E	Q	G	T	R	P	K	L	F	Y	L	N	A	P	S	K	K	G	L	T	R	E	S	E	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		T	T	S										S					S	S	T	T	S	S				S					S		S	S	T	T		S			G	G	G