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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1w63A_

Fold library idPDB HeaderMoleculeTitle
c1w63A_PDB header: endocytosisChain: A: PDB Molecule: adapter-related protein complex 1 gamma 1PDBTitle: ap1 clathrin adaptor core


Added to library: Tue Mar 16 13:41:14 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLEC
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Known secondary structure (DSSP)





TT


TTT
TTTTT


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAG
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Known secondary structure (DSSP) SSS



S
SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence EVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLA
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Known secondary structure (DSSP) S


GGGGGGGGGGTTTSTT




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTET
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Known secondary structure (DSSP) TTS


TTT
SSSSS
TTT
TTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence SKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTI
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Known secondary structure (DSSP) SSTS


T
SSTTTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence VDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID
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Known secondary structure (DSSP) GGGSS


SSST

SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence TIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSG
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Known secondary structure (DSSP) TGGGS
SSS
ST

S
STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQ
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Known secondary structure (DSSP)

SSS





STT

TT
SS
TT
S
 .........570.........580.........
Sequence QRAVEYNALFKKYDHMRSALLERMPVMEK
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Known secondary structure (DSSP) TTTTS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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