Email l.a.kelley@imperial.ac.uk Description P11447 Date Thu Jan 5 11:32:38 GMT 2012 Unique Job ID 3aaa938b36751f11

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1tj7a_ 100.0 100 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 2 d1i0aa_ 100.0 41 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 3 d1tjva_ 100.0 44 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 4 d1k62a_ 100.0 44 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 5 c2e9fC_ 100.0 50 PDB header:lyase Chain: C: PDB Molecule:argininosuccinate lyase; PDBTitle: crystal structure of t.th.hb8 argininosuccinate lyase complexed with2 l-arginine 6 d1hy0a_ 100.0 43 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 7 c2pfmA_ 100.0 18 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase (purb) from bacillus2 anthracis 8 d1c3ca_ 100.0 18 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 9 d1q5na_ 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 10 d1re5a_ 100.0 23 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 11 c3c8tA_ 100.0 22 PDB header:lyase Chain: A: PDB Molecule:fumarate lyase; PDBTitle: crystal structure of fumarate lyase from mesorhizobium sp. bnc1 12 d1fuoa_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 13 d1j3ua_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 14 c2vd6B_ 100.0 17 PDB header:lyase Chain: B: PDB Molecule:adenylosuccinate lyase; PDBTitle: human adenylosuccinate lyase in complex with its substrate2 n6-(1,2-dicarboxyethyl)-amp, and its products amp and3 fumarate. 15 d1yfma_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 16 c1yfmA_ 100.0 20 PDB header:lyase Chain: A: PDB Molecule:fumarase; PDBTitle: recombinant yeast fumarase 17 d1vdka_ 100.0 20 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 18 c3no9C_ 100.0 19 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase class ii; PDBTitle: crystal structure of apo fumarate hydratase from mycobacterium2 tuberculosis 19 d1jswa_ 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 20 c2qgaC_ 100.0 16 PDB header:lyase Chain: C: PDB Molecule:adenylosuccinate lyase; PDBTitle: plasmodium vivax adenylosuccinate lyase pv003765 with amp bound 21 c3ocfB_ not modelled 100.0 22 PDB header:lyase Chain: B: PDB Molecule:fumarate lyase:delta crystallin; PDBTitle: crystal structure of fumarate lyase:delta crystallin from brucella2 melitensis in native form 22 d1dofa_ not modelled 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 23 c3bhgA_ not modelled 100.0 16 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of adenylosuccinate lyase from legionella2 pneumophila 24 d1jswc_ not modelled 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 25 c2ptsA_ not modelled 100.0 18 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: crystal structure of wild type escherichia coli adenylosuccinate lyase 26 c1yisA_ not modelled 100.0 15 PDB header:lyase Chain: A: PDB Molecule:adenylosuccinate lyase; PDBTitle: structural genomics of caenorhabditis elegans: adenylosuccinate lyase 27 c3e04C_ not modelled 100.0 19 PDB header:lyase Chain: C: PDB Molecule:fumarate hydratase; PDBTitle: crystal structure of human fumarate hydratase 28 c3gtdB_ not modelled 100.0 18 PDB header:lyase Chain: B: PDB Molecule:fumarate hydratase class ii; PDBTitle: 2.4 angstrom crystal structure of fumarate hydratase from rickettsia2 prowazekii 29 c2fenA_ not modelled 100.0 17 PDB header:isomerase Chain: A: PDB Molecule:3-carboxy-cis,cis-muconate lactonizing enzyme; PDBTitle: 3-carboxy-cis,cis-muconate lactonizing enzyme from agrobacterium2 radiobacter s2 30 d1f1oa_ not modelled 100.0 19 Fold:L-aspartase-like Superfamily:L-aspartase-like Family:L-aspartase/fumarase 31 c3r6yG_ not modelled 100.0 21 PDB header:lyase Chain: G: PDB Molecule:aspartase; PDBTitle: crystal structure of chymotrypsin-treated aspartase from bacillus sp.2 ym55-1 32 c2rcyB_ not modelled 61.8 22 PDB header:oxidoreductase Chain: B: PDB Molecule:pyrroline carboxylate reductase; PDBTitle: crystal structure of plasmodium falciparum pyrroline carboxylate2 reductase (mal13p1.284) with nadp bound 33 c1x5bA_ not modelled 50.7 29 PDB header:protein binding Chain: A: PDB Molecule:signal transducing adaptor molecule 2; PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2 34 d2ahra1 not modelled 38.0 28 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:ProC C-terminal domain-like 35 d2di4a1 not modelled 33.6 18 Fold:FtsH protease domain-like Superfamily:FtsH protease domain-like Family:FtsH protease domain-like 36 d1yqga1 not modelled 32.1 25 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:ProC C-terminal domain-like 37 c2ctoA_ not modelled 30.2 58 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 38 c2xgvA_ not modelled 27.8 28 PDB header:viral protein Chain: A: PDB Molecule:psiv capsid n-terminal domain; PDBTitle: structure of the n-terminal domain of capsid protein from2 rabbit endogenous lentivirus (relik) 39 d1u5ta1 not modelled 22.9 23 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 40 c1p74B_ not modelled 19.6 16 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae 41 d1nvta2 not modelled 19.0 14 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 42 c3fbtB_ not modelled 18.7 13 PDB header:oxidoreductase, lyase Chain: B: PDB Molecule:chorismate mutase and shikimate 5-dehydrogenase PDBTitle: crystal structure of a chorismate mutase/shikimate 5-2 dehydrogenase fusion protein from clostridium3 acetobutylicum 43 d1vi2a2 not modelled 16.5 15 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 44 c3bbnC_ not modelled 16.1 63 PDB header:ribosome Chain: C: PDB Molecule:ribosomal protein s3; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. 45 c2vs0B_ not modelled 15.6 10 PDB header:cell invasion Chain: B: PDB Molecule:virulence factor esxa; PDBTitle: structural analysis of homodimeric staphylococcal aureus2 virulence factor esxa 46 d1npya2 not modelled 15.1 21 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 47 c3pgjB_ not modelled 14.9 17 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.49 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae o1 biovar eltor str. n169613 in complex with shikimate 48 c2ev9B_ not modelled 14.9 15 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate 49 c2zmeA_ not modelled 14.4 13 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 50 d1phza2 not modelled 14.4 22 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 51 d1g3pa2 not modelled 14.3 33 Fold:N-terminal domains of the minor coat protein g3p Superfamily:N-terminal domains of the minor coat protein g3p Family:N-terminal domains of the minor coat protein g3p 52 c1nvtA_ not modelled 14.0 14 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5'-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe or2 mj1084) in complex with nadp+ 53 d2ga1a1 not modelled 13.8 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Alr1493-like 54 c3o8qB_ not modelled 13.6 17 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase i alpha; PDBTitle: 1.45 angstrom resolution crystal structure of shikimate 5-2 dehydrogenase (aroe) from vibrio cholerae 55 c3tozA_ not modelled 13.5 27 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. 56 c2nloA_ not modelled 13.5 16 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum 57 c2hk8B_ not modelled 12.9 20 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution 58 c2ag8A_ not modelled 12.8 13 PDB header:oxidoreductase Chain: A: PDB Molecule:pyrroline-5-carboxylate reductase; PDBTitle: nadp complex of pyrroline-5-carboxylate reductase from neisseria2 meningitidis 59 d1mlwa_ not modelled 12.3 17 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 60 c1u5tA_ not modelled 12.1 23 PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex 61 c3e2tA_ not modelled 11.9 17 PDB header:oxidoreductase Chain: A: PDB Molecule:tryptophan 5-hydroxylase 1; PDBTitle: the catalytic domain of chicken tryptophan hydroxylase 12 with bound tryptophan 62 d1dlja1 not modelled 11.4 20 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:UDP-glucose/GDP-mannose dehydrogenase dimerisation domain 63 c1wjvA_ not modelled 11.2 56 PDB header:dna binding protein Chain: A: PDB Molecule:cell growth regulating nucleolar protein lyar; PDBTitle: solution structure of the n-terminal zinc finger domain of2 mouse cell growth regulating nucleolar protein lyar 64 d1j8ua_ not modelled 11.2 22 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 65 c3gt0A_ not modelled 11.1 26 PDB header:oxidoreductase Chain: A: PDB Molecule:pyrroline-5-carboxylate reductase; PDBTitle: crystal structure of pyrroline 5-carboxylate reductase from bacillus2 cereus. northeast structural genomics consortium target bcr38b 66 d2qalc1 not modelled 11.0 38 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 67 c3pwzA_ not modelled 10.9 13 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase 3; PDBTitle: crystal structure of an ael1 enzyme from pseudomonas putida 68 c2eggA_ not modelled 10.8 14 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus 69 d1p77a2 not modelled 10.8 15 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 70 d1k6ya1 not modelled 10.7 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 71 c1nytC_ not modelled 10.7 18 PDB header:oxidoreductase Chain: C: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: shikimate dehydrogenase aroe complexed with nadp+ 72 c3cuqA_ not modelled 10.5 13 PDB header:protein transport Chain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex 73 d1e0ea_ not modelled 10.5 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 74 d2qy9a1 not modelled 10.5 21 Fold:Four-helical up-and-down bundle Superfamily:Domain of the SRP/SRP receptor G-proteins Family:Domain of the SRP/SRP receptor G-proteins 75 c3u62A_ not modelled 10.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from thermotoga maritima 76 c1npyA_ not modelled 10.4 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 77 c3ke2A_ not modelled 10.3 19 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein yp_928783.1; PDBTitle: crystal structure of a duf2131 family protein (sama_2911) from2 shewanella amazonensis sb2b at 2.50 a resolution 78 d1q3ma_ not modelled 10.0 33 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 79 d1nyta2 not modelled 9.9 15 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 80 d1wjfa_ not modelled 9.9 20 Fold:DNA/RNA-binding 3-helical bundle Superfamily:N-terminal Zn binding domain of HIV integrase Family:N-terminal Zn binding domain of HIV integrase 81 c2o8kA_ not modelled 9.4 23 PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element 82 c3hfrA_ not modelled 9.0 24 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes 83 d1vkma_ not modelled 9.0 15 Fold:Indigoidine synthase A-like Superfamily:Indigoidine synthase A-like Family:Indigoidine synthase A-like 84 d1ltza_ not modelled 9.0 25 Fold:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Superfamily:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains Family:Aromatic aminoacid monoxygenases, catalytic and oligomerization domains 85 c3c24A_ not modelled 9.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution 86 c2jfqA_ not modelled 8.8 24 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of staphylococcus aureus glutamate2 racemase in complex with d-glutamate 87 d2voua2 not modelled 8.8 12 Fold:FAD-linked reductases, C-terminal domain Superfamily:FAD-linked reductases, C-terminal domain Family:PHBH-like 88 c1dipA_ not modelled 8.8 22 PDB header:acetylation Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures 89 c3m1eA_ not modelled 8.7 11 PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional regulator benm; PDBTitle: crystal structure of benm_dbd 90 c2gzmB_ not modelled 8.2 21 PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of the glutamate racemase from bacillus2 anthracis 91 c1vi2B_ not modelled 8.1 15 PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2; PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad 92 c3lq9B_ not modelled 7.7 20 PDB header:signaling protein Chain: B: PDB Molecule:dna-damage-inducible transcript 4 protein; PDBTitle: crystal strucure of human redd1, a hypoxia-induced regulator2 of mtor 93 d1sxjb1 not modelled 7.6 14 Fold:post-AAA+ oligomerization domain-like Superfamily:post-AAA+ oligomerization domain-like Family:DNA polymerase III clamp loader subunits, C-terminal domain 94 d1v5pa_ not modelled 7.5 50 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 95 c3eq5G_ not modelled 7.3 29 PDB header:signaling protein Chain: G: PDB Molecule:ski-like protein; PDBTitle: crystal structure of fragment 137 to 238 of the human ski-like protein 96 d1q8ha_ not modelled 7.3 29 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 97 c1q8hA_ not modelled 7.3 29 PDB header:metal binding protein Chain: A: PDB Molecule:osteocalcin; PDBTitle: crystal structure of porcine osteocalcin 98 c2p9xB_ not modelled 7.3 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ph0832; PDBTitle: crystal structure of ph0832 from pyrococcus horikoshii ot3 99 c2v27A_ not modelled 7.3 21 PDB header:oxidoreductase Chain: A: PDB Molecule:phenylalanine hydroxylase; PDBTitle: structure of the cold active phenylalanine hydroxylase from2 colwellia psychrerythraea 34h