PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3hfrA_

Fold library id	PDB Header	Molecule	Title
c3hfrA_	PDB header: isomerase	Chain: A: PDB Molecule: glutamate racemase;	PDBTitle: crystal structure of glutamate racemase from listeria2 monocytogenes

Links to external resources
Added to library: Sat Aug 28 20:55:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X K Q A I G F I D S G V G G L T V V R E V L K Q L P H E Q V Y Y L G D T A R C P Y G P R D K E E V A K F T W E X T N F L V D R G I K X L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T
T T
G G G
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I A C N T A T A A A L Y D I R E K L D I P V I G V I Q P G S R A A L K A T R N N K I G V L G T L G T V E S X A Y P T A L K G L N R R V E V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
S S S
T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L A C P K F V S V V E S G E Y K S A I A K K V V A E S L L P L K S T K I D T V I L G C T H Y P L L K P I I E N F X G D G V A V I N S G E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S G G G G G S
S T T G G G G
T T S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . .

Sequence T A S E V S A L L D Y H N L L D A T D E E I E H R F F T T G S T Q I F K D I A K D W L N X P D X T V E H I K L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	K	Q	A	I	G	F	I	D	S	G	V	G	G	L	T	V	V	R	E	V	L	K	Q	L	P	H	E	Q	V	Y	Y	L	G	D	T	A	R	C	P	Y	G	P	R	D	K	E	E	V	A	K	F	T	W	E	X	T	N	F	L	V	D	R	G	I	K	X	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S	T	T												T	T									G	G	G				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	C	N	T	A	T	A	A	A	L	Y	D	I	R	E	K	L	D	I	P	V	I	G	V	I	Q	P	G	S	R	A	A	L	K	A	T	R	N	N	K	I	G	V	L	G	T	L	G	T	V	E	S	X	A	Y	P	T	A	L	K	G	L	N	R	R	V	E	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																S	S					S													S	S	S														T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	A	C	P	K	F	V	S	V	V	E	S	G	E	Y	K	S	A	I	A	K	K	V	V	A	E	S	L	L	P	L	K	S	T	K	I	D	T	V	I	L	G	C	T	H	Y	P	L	L	K	P	I	I	E	N	F	X	G	D	G	V	A	V	I	N	S	G	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T							T	T		T	T	S												G	G	G	G	G	S									S	T	T	G	G	G	G										T	T	S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Sequence	T	A	S	E	V	S	A	L	L	D	Y	H	N	L	L	D	A	T	D	E	E	I	E	H	R	F	F	T	T	G	S	T	Q	I	F	K	D	I	A	K	D	W	L	N	X	P	D	X	T	V	E	H	I	K	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S														S	S													S	S		T	T