Emaill.a.kelley@imperial.ac.uk
DescriptionP0AGJ2
DateThu Jan 5 11:29:18 GMT 2012
Unique Job ID03822049b05be78c

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1zjrA_



100.0 42 PDB header:transferase
Chain: A: PDB Molecule:trna (guanosine-2'-o-)-methyltransferase;
PDBTitle: crystal structure of a. aeolicus trmh/spou trna modifying enzyme
2d1v2xa_



100.0 53 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
3d1gz0a1



100.0 28 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
4c1gz0G_



100.0 28 PDB header:transferase
Chain: G: PDB Molecule:hypothetical trna/rrna methyltransferase yjfh;
PDBTitle: 23s ribosomal rna g2251 2'o-methyltransferase rlmb
5c2ha8A_



100.0 22 PDB header:rna binding protein
Chain: A: PDB Molecule:tar (hiv-1) rna loop binding protein;
PDBTitle: methyltransferase domain of human tar (hiv-1) rna binding2 protein 1
6c1x7pB_



100.0 29 PDB header:transferase
Chain: B: PDB Molecule:rrna methyltransferase;
PDBTitle: crystal structure of the spou methyltransferase avirb from2 streptomyces viridochromogenes in complex with the cofactor adomet
7c1ipaA_



100.0 28 PDB header:transferase
Chain: A: PDB Molecule:rna 2'-o-ribose methyltransferase;
PDBTitle: crystal structure of rna 2'-o ribose methyltransferase
8c2i6dA_



100.0 28 PDB header:transferase
Chain: A: PDB Molecule:rna methyltransferase, trmh family;
PDBTitle: the structure of a putative rna methyltransferase of the trmh family2 from porphyromonas gingivalis.
9c3gyqB_



100.0 24 PDB header:transferase
Chain: B: PDB Molecule:rrna (adenosine-2'-o-)-methyltransferase;
PDBTitle: structure of the thiostrepton-resistance methyltransferase2 s-adenosyl-l-methionine complex
10d1ipaa1



100.0 27 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
11c3ic6A_



100.0 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative methylase family protein;
PDBTitle: crystal structure of putative methylase family protein from neisseria2 gonorrhoeae
12d1mxia_



100.0 23 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:SpoU-like RNA 2'-O ribose methyltransferase
13c3ilkB_



100.0 18 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized trna/rrna methyltransferase hi0380;
PDBTitle: the structure of a probable methylase family protein from haemophilus2 influenzae rd kw20
14c3onpA_



100.0 23 PDB header:transferase
Chain: A: PDB Molecule:trna/rrna methyltransferase (spou);
PDBTitle: crystal structure of trna/rrna methyltransferase spou from rhodobacter2 sphaeroides
15c3e5yB_



100.0 24 PDB header:transferase
Chain: B: PDB Molecule:trmh family rna methyltransferase;
PDBTitle: crystal structure of trmh family rna methyltransferase from2 burkholderia pseudomallei
16c3l8uA_



100.0 24 PDB header:transferase
Chain: A: PDB Molecule:putative rrna methylase;
PDBTitle: crystal structure of smu.1707c, a putative rrna methyltransferase from2 streptococcus mutans ua159
17c3ktyA_



100.0 21 PDB header:transferase
Chain: A: PDB Molecule:probable methyltransferase;
PDBTitle: crystal structure of probable methyltransferase from bordetella2 pertussis tohama i
18c3dcmX_



99.9 18 PDB header:transferase
Chain: X: PDB Molecule:uncharacterized protein tm_1570;
PDBTitle: crystal structure of the thermotoga maritima spout family2 rna-methyltransferase protein tm1570 in complex with s-3 adenosyl-l-methionine
19d1vhka2



97.4 15 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YggJ C-terminal domain-like
20c1vhkA_



97.0 15 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein yqeu;
PDBTitle: crystal structure of an hypothetical protein
21c2yy8B_



not modelled 96.6 18 PDB header:transferase
Chain: B: PDB Molecule:upf0106 protein ph0461;
PDBTitle: crystal structure of archaeal trna-methylase for position2 56 (atrm56) from pyrococcus horikoshii, complexed with s-3 adenosyl-l-methionine
22c3kw2A_



not modelled 96.4 13 PDB header:transferase
Chain: A: PDB Molecule:probable r-rna methyltransferase;
PDBTitle: crystal structure of probable rrna-methyltransferase from2 porphyromonas gingivalis
23c2egwB_



not modelled 96.3 10 PDB header:rna methyltransferase
Chain: B: PDB Molecule:upf0088 protein aq_165;
PDBTitle: crystal structure of rrna methyltransferase with sah ligand
24c3ai9X_



not modelled 96.2 16 PDB header:transferase
Chain: X: PDB Molecule:upf0217 protein mj1640;
PDBTitle: crystal structure of duf358 protein reveals a putative spout-class2 rrna methyltransferase
25d1nxza2



not modelled 96.2 10 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YggJ C-terminal domain-like
26d2o3aa1



not modelled 95.4 18 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:AF0751-like
27c1vhyB_



not modelled 94.7 14 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein hi0303;
PDBTitle: crystal structure of haemophilus influenzae protein hi0303, pfam2 duf558
28d2qwva1



not modelled 94.3 15 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:AF1056-like
29d1v6za2



not modelled 92.3 21 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YggJ C-terminal domain-like
30d2qmma1



not modelled 88.1 14 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:AF1056-like
31c2cx8B_



not modelled 86.9 19 PDB header:transferase
Chain: B: PDB Molecule:methyl transferase;
PDBTitle: crystal structure of methyltransferase with ligand(sah)
32c1z85B_



not modelled 60.9 12 PDB header:transferase
Chain: B: PDB Molecule:hypothetical protein tm1380;
PDBTitle: crystal structure of a predicted rna methyltransferase (tm1380) from2 thermotoga maritima msb8 at 2.12 a resolution
33c1k3rA_



not modelled 49.6 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:conserved protein mt0001;
PDBTitle: crystal structure of the methyltransferase with a knot from2 methanobacterium thermoautotrophicum
34d1ml4a2



not modelled 47.2 13 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
35d1a9xa3



not modelled 40.3 12 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:BC N-terminal domain-like
36c2v3jA_



not modelled 39.2 16 PDB header:ribosomal protein
Chain: A: PDB Molecule:essential for mitotic growth 1;
PDBTitle: the yeast ribosome synthesis factor emg1 alpha beta knot2 fold methyltransferase
37d2b7oa1



not modelled 38.7 17 Fold:TIM beta/alpha-barrel
Superfamily:Aldolase
Family:Class-II DAHP synthetase
38d1o6da_



not modelled 38.6 26 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YbeA-like
39d1j6ua2



not modelled 31.8 11 Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
40d1to0a_



not modelled 31.0 14 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YbeA-like
41d1k3ra2



not modelled 30.7 26 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:Hypothetical protein MTH1 (MT0001), dimerisation domain
42c1j6uA_



not modelled 30.0 13 PDB header:ligase
Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc;
PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution
43d1vh0a_



not modelled 29.8 11 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YbeA-like
44d1ns5a_



not modelled 29.6 26 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:YbeA-like
45d1mx3a1



not modelled 29.3 16 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
46d1ekxa2



not modelled 28.9 15 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
47c2omeA_



not modelled 27.0 18 PDB header:oxidoreductase
Chain: A: PDB Molecule:c-terminal-binding protein 2;
PDBTitle: crystal structure of human ctbp2 dehydrogenase complexed with nad(h)
48d1qpoa1



not modelled 25.7 9 Fold:TIM beta/alpha-barrel
Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like
Family:NadC C-terminal domain-like
49c2wl8D_



not modelled 25.7 14 PDB header:protein transport
Chain: D: PDB Molecule:peroxisomal biogenesis factor 19;
PDBTitle: x-ray crystal structure of pex19p
50d1o4ua1



not modelled 25.1 16 Fold:TIM beta/alpha-barrel
Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like
Family:NadC C-terminal domain-like
51c3gg9C_



not modelled 24.8 6 PDB header:oxidoreductase
Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein;
PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum
52c3o7bA_



not modelled 23.2 16 PDB header:transferase
Chain: A: PDB Molecule:ribosome biogenesis nep1 rna methyltransferase;
PDBTitle: crystal structure of archaeoglobus fulgidus nep1 bound to s-2 adenosylhomocysteine
53c3czpA_



not modelled 21.2 22 PDB header:transferase
Chain: A: PDB Molecule:putative polyphosphate kinase 2;
PDBTitle: crystal structure of putative polyphosphate kinase 2 from pseudomonas2 aeruginosa pa01
54c1qpoA_



not modelled 20.4 9 PDB header:transferase
Chain: A: PDB Molecule:quinolinate acid phosphoribosyl transferase;
PDBTitle: quinolinate phosphoribosyl transferase (qaprtase) apo-enzyme from2 mycobacterium tuberculosis
55c2y0fD_



not modelled 19.9 29 PDB header:oxidoreductase
Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27
56c2o8vA_



not modelled 19.8 15 PDB header:oxidoreductase
Chain: A: PDB Molecule:phosphoadenosine phosphosulfate reductase;
PDBTitle: paps reductase in a covalent complex with thioredoxin c35a
57c2oq2B_



not modelled 19.0 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:phosphoadenosine phosphosulfate reductase;
PDBTitle: crystal structure of yeast paps reductase with pap, a product complex
58d1sura_



not modelled 18.1 15 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:PAPS reductase-like
59c2x3yA_



not modelled 18.0 19 PDB header:isomerase
Chain: A: PDB Molecule:phosphoheptose isomerase;
PDBTitle: crystal structure of gmha from burkholderia pseudomallei
60c2yqeA_



not modelled 17.7 15 PDB header:dna binding protein
Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d;
PDBTitle: solution structure of the arid domain of jarid1d protein
61d1nkua_



not modelled 17.3 29 Fold:DNA-glycosylase
Superfamily:DNA-glycosylase
Family:3-Methyladenine DNA glycosylase I (Tag)
62c2jg6A_



not modelled 16.8 25 PDB header:hydrolase
Chain: A: PDB Molecule:dna-3-methyladenine glycosidase;
PDBTitle: crystal structure of a 3-methyladenine dna glycosylase i2 from staphylococcus aureus
63c3ajfA_



not modelled 16.6 25 PDB header:viral protein
Chain: A: PDB Molecule:non-structural protein 3;
PDBTitle: structural insigths into dsrna binding and rna silencing suppression2 by ns3 protein of rice hoja blanca tenuivirus
64c2zy3A_



not modelled 16.4 26 PDB header:lyase
Chain: A: PDB Molecule:l-aspartate beta-decarboxylase;
PDBTitle: dodecameric l-aspartate beta-decarboxylase
65c2w2kB_



not modelled 16.3 10 PDB header:oxidoreductase
Chain: B: PDB Molecule:d-mandelate dehydrogenase;
PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a.
66c3q4gA_



not modelled 16.2 17 PDB header:ligase
Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase;
PDBTitle: structure of nad synthetase from vibrio cholerae
67c1dvpA_



not modelled 15.3 16 PDB header:transferase
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine
PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
68c2fe3B_



not modelled 15.1 19 PDB header:dna binding protein
Chain: B: PDB Molecule:peroxide operon regulator;
PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch
69c2b7pA_



not modelled 14.9 11 PDB header:transferase
Chain: A: PDB Molecule:probable nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of quinolinic acid phosphoribosyltransferase from2 helicobacter pylori
70d2f06a1



not modelled 14.8 17 Fold:Ferredoxin-like
Superfamily:ACT-like
Family:BT0572-like
71d2v3ka1



not modelled 14.5 17 Fold:alpha/beta knot
Superfamily:alpha/beta knot
Family:EMG1/NEP1-like
72c2jbmA_



not modelled 14.5 13 PDB header:transferase
Chain: A: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: qprtase structure from human
73c3mwmA_



not modelled 14.4 13 PDB header:transcription
Chain: A: PDB Molecule:putative metal uptake regulation protein;
PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur
74d1e8ca2



not modelled 14.4 8 Fold:MurD-like peptide ligases, peptide-binding domain
Superfamily:MurD-like peptide ligases, peptide-binding domain
Family:MurCDEF C-terminal domain
75d1x7da_



not modelled 13.4 15 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Ornithine cyclodeaminase-like
76c2qipA_



not modelled 13.4 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function vpa0982;
PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633
77d1o17a2



not modelled 12.8 45 Fold:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family:Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
78c2o03A_



not modelled 12.6 15 PDB header:gene regulation
Chain: A: PDB Molecule:probable zinc uptake regulation protein furb;
PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator
79c3fxaA_



not modelled 12.5 12 PDB header:sugar binding protein
Chain: A: PDB Molecule:sis domain protein;
PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution
80c2goyC_



not modelled 12.4 19 PDB header:oxidoreductase
Chain: C: PDB Molecule:adenosine phosphosulfate reductase;
PDBTitle: crystal structure of assimilatory adenosine 5'-2 phosphosulfate reductase with bound aps
81d2gy9b1



not modelled 12.3 23 Fold:Flavodoxin-like
Superfamily:Ribosomal protein S2
Family:Ribosomal protein S2
82d1dvpa1



not modelled 12.1 19 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
83c2nacA_



not modelled 11.8 12 PDB header:oxidoreductase(aldehyde(d),nad+(a))
Chain: A: PDB Molecule:nad-dependent formate dehydrogenase;
PDBTitle: high resolution structures of holo and apo formate dehydrogenase
84d1pg5a2



not modelled 11.3 13 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
85c2zkqb_



not modelled 11.2 18 PDB header:ribosomal protein/rna
Chain: B: PDB Molecule:rna expansion segment es3;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
86c3navB_



not modelled 10.8 7 PDB header:lyase
Chain: B: PDB Molecule:tryptophan synthase alpha chain;
PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961
87d1q9ua_



not modelled 10.4 21 Fold:TBP-like
Superfamily:TT1751-like
Family:TT1751-like
88c1x3lA_



not modelled 10.3 22 PDB header:transferase
Chain: A: PDB Molecule:hypothetical protein ph0495;
PDBTitle: crystal structure of the ph0495 protein from pyrococccus horikoshii2 ot3
89d1oaoc_



not modelled 10.0 15 Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
90c1o4uA_



not modelled 9.2 16 PDB header:transferase
Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase;
PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
91d1kkxa_



not modelled 9.2 14 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:ARID-like
Family:ARID domain
92c3hpbA_



not modelled 9.2 23 PDB header:protein transport
Chain: A: PDB Molecule:snx5 protein;
PDBTitle: crystal structure of snx5-px domain in p212121 space group
93c3bchA_



not modelled 9.1 21 PDB header:cell adhesion, ribosomal protein
Chain: A: PDB Molecule:40s ribosomal protein sa;
PDBTitle: crystal structure of the human laminin receptor precursor
94d1duvg2



not modelled 9.1 10 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
95d1hjra_



not modelled 8.9 33 Fold:Ribonuclease H-like motif
Superfamily:Ribonuclease H-like
Family:RuvC resolvase
96d1dxya1



not modelled 8.9 11 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:Formate/glycerate dehydrogenases, NAD-domain
97c2kwuA_



not modelled 8.7 40 PDB header:protein binding/signaling protein
Chain: A: PDB Molecule:dna polymerase iota;
PDBTitle: solution structure of ubm2 of murine polymerase iota in complex with2 ubiquitin
98c3l0gD_



not modelled 8.7 11 PDB header:transferase
Chain: D: PDB Molecule:nicotinate-nucleotide pyrophosphorylase;
PDBTitle: crystal structure of nicotinate-nucleotide pyrophosphorylase from2 ehrlichia chaffeensis at 2.05a resolution
99c3bbnB_



not modelled 8.7 13 PDB header:ribosome
Chain: B: PDB Molecule:ribosomal protein s2;
PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome.