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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2y0fD_

Fold library idPDB HeaderMoleculeTitle
c2y0fD_PDB header: oxidoreductaseChain: D: PDB Molecule: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27


Added to library: Sat Jan 29 08:38:46 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRRPTPTVYVGRVPIGGAHPIAVQSMTNTPTRDVEATTAQVLELHRAGSEIVRLTVNDEEAAKAVPEIKR
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Known secondary structure (DSSP)






TTSTTS



S
TT
TT
S
STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPEHFAEMIRIAMDLGKPVRIGANWGSLDPAL
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Known secondary structure (DSSP) TT



SS


S


TTTTT


GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGEDKLVLSAKVSKARDLVWVYRELARRTQ
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Known secondary structure (DSSP) SSS




GGG
BSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence APLHLGLTEAGMGVKGIVASAAALAPLLLEGIGDTIRVSLTPSPKEPRTKEVEVAQEILQALGLRAFAPE
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Known secondary structure (DSSP) S
BB

SST

S


STT

TTTTTSS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VTSCPGCGRTTSTFFQELAEEVSRRLKERLPEWRARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGA
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Known secondary structure (DSSP)



SS




TTGGG
S
TTTTGGGGTT
S


T
 .........360.........370.........380.........390...
Sequence GEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVKTRFAPKA
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Known secondary structure (DSSP) T

SSSS
STTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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