PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ilkB_

Fold library id	PDB Header	Molecule	Title
c3ilkB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized trna/rrna methyltransferase	PDBTitle: the structure of a probable methylase family protein from2 haemophilus influenzae rd kw20

Links to external resources
Added to library: Sun Aug 29 01:02:30 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X L E N I R I V L I E T S H S G N I G S A A R A X K T X G L T Q L C L V S P K S V D E Q S Y A L S A G A E N I V K N A R V V D S F D E A V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
S
T
S
S
S T T
T
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D C S L V I G T S A R L R H L Q N T L I E P R E C A E K V V A Y K G K I A I V F G R E R I G L T N E E L L K C H Y H L N I P A N P D Y S S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G T T T
S
B T T T B
T T
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N L A X A V Q L V S Y E L R X A F L V Q N N K K I E K N Y P T T D Q L A Y F F D Y T E R I Y Q S L G F I Q N Q G V X R K L K R L Y Y R A K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence E K N E L N I L N G X L S A V E K R I D L T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	L	E	N	I	R	I	V	L	I	E	T	S	H	S	G	N	I	G	S	A	A	R	A	X	K	T	X	G	L	T	Q	L	C	L	V	S	P	K	S	V	D	E	Q	S	Y	A	L	S	A	G	A	E	N	I	V	K	N	A	R	V	V	D	S	F	D	E	A	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G							S		S																T								S		S			S								T	T							T					S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	C	S	L	V	I	G	T	S	A	R	L	R	H	L	Q	N	T	L	I	E	P	R	E	C	A	E	K	V	V	A	Y	K	G	K	I	A	I	V	F	G	R	E	R	I	G	L	T	N	E	E	L	L	K	C	H	Y	H	L	N	I	P	A	N	P	D	Y	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S										G	G	G	T	T	T																S								B	T	T	T	B							T	T		S									T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	L	A	X	A	V	Q	L	V	S	Y	E	L	R	X	A	F	L	V	Q	N	N	K	K	I	E	K	N	Y	P	T	T	D	Q	L	A	Y	F	F	D	Y	T	E	R	I	Y	Q	S	L	G	F	I	Q	N	Q	G	V	X	R	K	L	K	R	L	Y	Y	R	A	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T																										T	T				S															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	E	K	N	E	L	N	I	L	N	G	X	L	S	A	V	E	K	R	I	D	L	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T